Gene
| Gene Model ID | pfu_aug2.0_1653.1_11790 |
|---|---|
| Locus | scaffold1653.1 : 84106 ... 101008 : + |
| To GenomeBrowser | scaffold1653.1:84106..101008 |
| Genes list of scaffold | scaffold1653.1 |
| Synonym | pfu_aug1.0_20034.1_33062 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1653.1_11790.t2 | 1 | 1 | Reprolysin_4 | 165 | 391 | 1.5e-12 | 47.4 | 1.7e-15 | 4.3e-12 | 46.0 |
| pfu_aug2.0_1653.1_11790.t2 | 1 | 1 | Reprolysin_5 | 165 | 363 | 2.6e-10 | 40.5 | 3.4e-13 | 8.5e-10 | 38.8 |
| pfu_aug2.0_1653.1_11790.t2 | 2 | 1 | Reprolysin | 166 | 185 | 1.2e-14 | 54.3 | 0.99 | 2400.0 | -2.2 |
| pfu_aug2.0_1653.1_11790.t2 | 2 | 1 | Reprolysin_2 | 183 | 211 | 4.4e-11 | 43.1 | 0.16 | 380.0 | 1.0 |
| pfu_aug2.0_1653.1_11790.t2 | 2 | 1 | Reprolysin_3 | 194 | 211 | 7.4e-11 | 42.6 | 0.19 | 470.0 | 1.2 |
| pfu_aug2.0_1653.1_11790.t2 | 2 | 2 | Reprolysin_3 | 255 | 346 | 7.4e-11 | 42.6 | 7.9e-14 | 1.9e-10 | 41.2 |
| pfu_aug2.0_1653.1_11790.t2 | 2 | 2 | Reprolysin | 257 | 404 | 1.2e-14 | 54.3 | 1.5e-17 | 3.8e-14 | 52.7 |
| pfu_aug2.0_1653.1_11790.t2 | 2 | 2 | Reprolysin_2 | 298 | 390 | 4.4e-11 | 43.1 | 1.4e-13 | 3.4e-10 | 40.2 |
Transcript
| Transcript ID | pfu_aug2.0_1653.1_11790.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1653.1_11790.t1 atgacttattttctttgtttttacttctttatttggattttatttttattacagaatgtttcttctatacccaaaggaca caaagtagatgtaaagatcacagaaatcccggaacagtccaatgctacgtccagatgtaatttcccatcaactttaaccg ttaccatagaaacgaatgacggaaataccatcagactttctctaaaaatgagatcgttaccaccagcgtacggagatgcc ccgatttttgttctgagaaaatcccccggaagtggaacactcttggaagaacagccatctgcttctcgagagcaaaattt cagattttaccatgactcgggaattagggaaacgtccatcattgtccattgcaagacagacangactagttgtgctacag aatcatcgaattttcatagaaaagagaatgatttattaaaggataactccaacatcagacatcgacgtcaagtggacatt caacaaccttacgtcatcgatgtattagtcatcatagattacaaaatatatacaaaatggtacgagactacaacaggtgt tgcattagagagagaacaggaaacaaaaactgaaatacatagctatttttcatatttcatgcatgaagtggggctccggt acgaaagcattgatagagctgatctgcgatttaaacttaaagttacgagcttcattttagcagatagtccccaagtgttt ttggtaacagaagttctaaaagaaccaaggtcatcaagggctatcttggacgccaatgaatgtctgagaagttttcggac ttgggtaaacaacacgtccggtttaccaccacacgatcatgctatgctttttacaggatatgatttgtacacgaagaaag acaatgcaaaacagttacacactgcaggattggcttatatacgtacaatgtgtaagcatggcggagatagtgtgtccgtc gttgaggatcacggtggattccaaaatgtaccaactgcagcccatgaaatcggacacagtcttggtgccagacatgacgg ggaggataatctttgtagctctgacgatcattatatcatgcattcatccgactccgggacacaagtacctacagagaaac gagtcaaccaatggcatttctctcagtgctctcttgatgcttttagaagtttcattttcgagttgtcaagggagggctac acgtgcctaacagaaacctacgaggatatcacatcatccacgcccattggggttcctggacaagagtatgatcctgacga gcaatgccgaatgatctggggtcctcagtcctacctttgcaggggtgaggaattcggcaatgccagcaacatatgttctt ctatgtactgtagagaccctgacacagagaacgactgtgtactccatacagccgccaggggaacctcatgtggtaacaaa atgtggtgtgttgagggaatttgttcattctccgacgatgccccagagaaagatgaggcatgtgtattaggtgatcagcc tggtacagcgtttgtgggtagaccttgtgacgagttgaccagagatacaccctcatattgttaccagagtagggtgcggg caagatgctgtgcaagttgtgccaaacaatattcctggatttcaggttgcgaatacggagatcgcgtgaatggttgcaaa acataccattgtaatttggtaacaacagacaataatgttcttagtgagtgttgttcaacatgctcctatggagaaagaat tcaaactacaaataggccaagatacaccctccgcccaatcacaacagagaagactgatgtatcaacagataatgtatttt gttcagatacagcgactgtgaacggtcaatcttgtcacgtttttgtgtcagcgcatggacgccatgtttgttacgattct gctattcagtcatcttgctgtaaaagctgtagtgatgttatggattcaattaacgatggttgtgaatacggtgaccgcca gccatcattctgttctcagcaacataacaaatccagtacttggtgttctaaatatagtgactattgctgtaggacgtgct ctacattgactttcaacagtgccaaaacagttttatccaatacatcgacattatcgcttatcatgacaatttttctcttt atcatatcgtaa |
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| Transcript ID | pfu_aug2.0_1653.1_11790.t2 |
| Definition | - |
>pfu_aug2.0_1653.1_11790.t2 atgacttattttctttgtttttacttctttatttggattttatttttattacagaatgtttcttctatacccaaaggaca caaagtagatgtaaagatcacagaaatcccggaacagtccaatgctacgtccagatgtaatttcccatcaactttaaccg ttaccatagaaacgaatgacggaaataccatcagactttctctaaaaatgagatcgttaccaccagcgtacggagatgcc ccgatttttgttctgagaaaatcccccggaagtggaacactcttggaagaacagccatctgcttctcgagagcaaaattt cagattttaccatgactcgggaattagggaaacgtccatcattgtccattgcaagacagacangactagttgtgctacag aatcatcgaattttcatagaaaagagaatgatttattaaaggataactccaacatcagacatcgacgtcaagtggacatt caacaaccttacgtcatcgatgtattagtcatcatagattacaaaatatatacaaaatggtacgagactacaacaggtgt tgcattagagagagaacaggaaacaaaaactgaaatacatagctatttttcatatttcatgcatgaagtggggctccggt acgaaagcattgatagagctgatctgcgatttaaacttaaagttacgagcttcattttagcagatagtccccaagtgttt ttggtaacagaagttctaaaagaaccaaggtcatcaagggctatcttggacgccaatgaatgtctgagaagttttcggac ttgggtaaacaacacgtccggtttaccaccacacgatcatgctatgctttttacaggatatgatttgtacacgaagaaag acaatgcaaaacagttacacactgcaggattggcttatatacgtacaatgtgtaagcatggcggagatagtgtgtccgtc gttgaggatcacggtggattccaaaatgtaccaactgcagcccatgaaatcggacacagtcttggtgccagacatgacgg ggaggataatctttgtagctctgacgatcattatatcatgcattcatccgactccgggacacaagtacctacagagaaac gagtcaaccaatggcatttctctcagtgctctcttgatgcttttagaagtttcattttcgagttgtcaagggagggctac acgtgcctaacagaaacctacgaggatatcacatcatccacgcccattggggttcctggacaagagtatgatcctgacga gcaatgccgaatgatctggggtcctcagtcctacctttgcaggggtgaggaattcggcaatgccagcaacatatgttctt ctatgtactgtagagaccctgacacagagaacgactgtgtactccatacagccgccaggggaacctcatgtggtaacaaa atgtggtgtgttgagggaatttgttcattctccgacgatgccccagagaaagatgaggcatgtgtattaggtgatcagcc tggtacagcgtttgtgggtagaccttgtgacgagttgaccagagatacaccctcatattgttaccagagtagggtgcggg caagatgctgtgcaagttgtgccaaacaatattcctggatttcaggttgtgaatacggtgaccgccagccatcattctgt tctcagcaacataacaaatccagtacttggtgttctaaatatagtgactattgctgtaggacgtgctctacattgacttt caacagtgccaaaacagttttatccaatacatcgacattatcgcttatcatgacaatttttctctttatcatatcgtaa |
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Protein
| Protein ID | pfu_aug2.0_1653.1_11790.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1653.1_11790.t1 MTYFLCFYFFIWILFLLQNVSSIPKGHKVDVKITEIPEQSNATSRCNFPSTLTVTIETNDGNTIRLSLKMRSLPPAYGDA PIFVLRKSPGSGTLLEEQPSASREQNFRFYHDSGIRETSIIVHCKTDXTSCATESSNFHRKENDLLKDNSNIRHRRQVDI QQPYVIDVLVIIDYKIYTKWYETTTGVALEREQETKTEIHSYFSYFMHEVGLRYESIDRADLRFKLKVTSFILADSPQVF LVTEVLKEPRSSRAILDANECLRSFRTWVNNTSGLPPHDHAMLFTGYDLYTKKDNAKQLHTAGLAYIRTMCKHGGDSVSV VEDHGGFQNVPTAAHEIGHSLGARHDGEDNLCSSDDHYIMHSSDSGTQVPTEKRVNQWHFSQCSLDAFRSFIFELSREGY TCLTETYEDITSSTPIGVPGQEYDPDEQCRMIWGPQSYLCRGEEFGNASNICSSMYCRDPDTENDCVLHTAARGTSCGNK MWCVEGICSFSDDAPEKDEACVLGDQPGTAFVGRPCDELTRDTPSYCYQSRVRARCCASCAKQYSWISGCEYGDRVNGCK TYHCNLVTTDNNVLSECCSTCSYGERIQTTNRPRYTLRPITTEKTDVSTDNVFCSDTATVNGQSCHVFVSAHGRHVCYDS AIQSSCCKSCSDVMDSINDGCEYGDRQPSFCSQQHNKSSTWCSKYSDYCCRTCSTLTFNSAKTVLSNTSTLSLIMTIFLF IIS |
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| Protein ID | pfu_aug2.0_1653.1_11790.t2 |
| Definition | - |
>pfu_aug2.0_1653.1_11790.t2 MTYFLCFYFFIWILFLLQNVSSIPKGHKVDVKITEIPEQSNATSRCNFPSTLTVTIETNDGNTIRLSLKMRSLPPAYGDA PIFVLRKSPGSGTLLEEQPSASREQNFRFYHDSGIRETSIIVHCKTDXTSCATESSNFHRKENDLLKDNSNIRHRRQVDI QQPYVIDVLVIIDYKIYTKWYETTTGVALEREQETKTEIHSYFSYFMHEVGLRYESIDRADLRFKLKVTSFILADSPQVF LVTEVLKEPRSSRAILDANECLRSFRTWVNNTSGLPPHDHAMLFTGYDLYTKKDNAKQLHTAGLAYIRTMCKHGGDSVSV VEDHGGFQNVPTAAHEIGHSLGARHDGEDNLCSSDDHYIMHSSDSGTQVPTEKRVNQWHFSQCSLDAFRSFIFELSREGY TCLTETYEDITSSTPIGVPGQEYDPDEQCRMIWGPQSYLCRGEEFGNASNICSSMYCRDPDTENDCVLHTAARGTSCGNK MWCVEGICSFSDDAPEKDEACVLGDQPGTAFVGRPCDELTRDTPSYCYQSRVRARCCASCAKQYSWISGCEYGDRQPSFC SQQHNKSSTWCSKYSDYCCRTCSTLTFNSAKTVLSNTSTLSLIMTIFLFIIS |
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