Gene
| Gene Model ID | pfu_aug2.0_1665.1_18457 |
|---|---|
| Locus | scaffold1665.1 : 55345 ... 75625 : - |
| To GenomeBrowser | scaffold1665.1:55345..75625 |
| Genes list of scaffold | scaffold1665.1 |
| Synonym | pfu_aug1.0_6984.1_02360 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1665.1_18457.t1 | 1 | 1 | WW | 95 | 124 | 8.6e-08 | 31.9 | 1.2e-11 | 1.8e-07 | 30.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1665.1_18457.t1 | gi|524895415|ref|XP_005104190.1| | PREDICTED: phosphorylated CTD-interacting factor 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1665.1_18457.t1 | gi|676450572|ref|XP_009052422.1| | hypothetical protein LOTGIDRAFT_115378 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1665.1_18457.t1 | gi|260797924|ref|XP_002593950.1| | hypothetical protein BRAFLDRAFT_118827 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1665.1_18457.t1 | gi|291221943|ref|XP_002730979.1| | PREDICTED: phosphorylated CTD-interacting factor 1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1665.1_18457.t1 | gi|662191057|ref|XP_008468325.1| | PREDICTED: phosphorylated CTD-interacting factor 1 [Diaphorina citri] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1665.1_18457.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1665.1_18457.t1 atggagactgttgattctcagagaaaagtcccaaacggagaggggaagctaacccagtctccagggggcacaaacgacgt aagccaacctccgctgcaaactgatggcaagcctacttcaaccatagctccaagtacttcatcttcattatcatcatcat catcagttcctatgacggtgcaaatccctcatgctaatcaactggcacgacagagtagtctgcccttgtctccgcagccg ctgtctcccgatcccgtacacgatttaccagtagagctgctccaggcgggatggaggaagttctggagccgccgtgagca gagagagtactacttcaacaaaaacaccaatgagtctctgtgggatatgccacagcttactcactcgccacatcaggatt tgctgacagacccccttgggatcagtggtccaggtccctctcctttaccaaataaccacgatttacgtcttagtcgacct agcatcgatattccccctcaacaagtgggagaaaaaaggcgagccagttttgagtcccagaatagtccgacaaaacggcc ggcatttacttacagtccattctggaattttgagattcctacaaactgtgtgatatttgagcgtgttccgtgcagccagc ctccgcctcttccggagatcgagcagatgagagctcagctagtggctagactaagacaacactgccaggagttatgtcat actagagaaggaattgatgccccagtggaatcatttaatcgttggctattagaaaggaaagtttgtgataagggaatcga ttcaatgttaccgtcggcatgtgcacgggaggtttccccgtcaatgtacagggaaattatgaacgatataccagtcaaac ttgtcaaacctaaatattcgggggacgcaaggaaacagctcttcaagtatgcagaggcagcgaagaagatgattgaaacc agaaacgcatcatctgacagcagaaaagtggtgaagtggaacgtagaggatacgtttacatggttacggaaacaacagaa tgcttcatatgaggattatctggaacgattagcccatttgaagcgtcagtgccagccccacattatggaagcagctaaga gttctgtagagggcatatgtagtaaaatatataacatgtcctgtgaatctgaaccaacaatggaggaaacacaaagaaat caacacagcctacccctatcgagtgtgtcgagaacatcttttgtcaacaaaaacaacaaactgcgggaattcttcgacaa catggataattactcccacgtaatgctccagaaggtagatggttattggttcataaaacaacggagctatagctgtcata ctatgtctagatcttctcatctcagcagcgaatcagtacggccgagggtgcatttagacgcagtgacggagaataaagtg gtcaattcagtatcagtacgacgttcctatggtaactgtagtatcccagggtgcaactgctgcagcagtgatgatggatc gatgtatatgcccataacggttccaaagagaaatcctaccgattggaatcaacaaaggtacataaaacaaaacagcatgt caatgaatactgcgtcatctcgttatcacattgccactctacctcccactggttacccgactgagcctcgtttataccaa cacgaagctccgccagcggcaagcacgttgaggttttcaggtcagaaggatatgacgagagcagacataaaaagcaagga catgttggaaatcaaccacttgaaatcaaaaataggactcacaacagaaaggtatcaaggatttgcccgaaagtccaatg ttggaatgaaacaaacacagttcatcaagtttaattcaccagtcaccatttcagctaaggattcaatgagaataaaagtg acggcatcaactccagccatccgtatgagaaataaaaacaaattaacacagttggcaaagcaacagactccacacccaaa cctctctgctatcaaacttcctgcgatcacaaagaccaaacattgctaa |
|
Protein
| Protein ID | pfu_aug2.0_1665.1_18457.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1665.1_18457.t1 METVDSQRKVPNGEGKLTQSPGGTNDVSQPPLQTDGKPTSTIAPSTSSSLSSSSSVPMTVQIPHANQLARQSSLPLSPQP LSPDPVHDLPVELLQAGWRKFWSRREQREYYFNKNTNESLWDMPQLTHSPHQDLLTDPLGISGPGPSPLPNNHDLRLSRP SIDIPPQQVGEKRRASFESQNSPTKRPAFTYSPFWNFEIPTNCVIFERVPCSQPPPLPEIEQMRAQLVARLRQHCQELCH TREGIDAPVESFNRWLLERKVCDKGIDSMLPSACAREVSPSMYREIMNDIPVKLVKPKYSGDARKQLFKYAEAAKKMIET RNASSDSRKVVKWNVEDTFTWLRKQQNASYEDYLERLAHLKRQCQPHIMEAAKSSVEGICSKIYNMSCESEPTMEETQRN QHSLPLSSVSRTSFVNKNNKLREFFDNMDNYSHVMLQKVDGYWFIKQRSYSCHTMSRSSHLSSESVRPRVHLDAVTENKV VNSVSVRRSYGNCSIPGCNCCSSDDGSMYMPITVPKRNPTDWNQQRYIKQNSMSMNTASSRYHIATLPPTGYPTEPRLYQ HEAPPAASTLRFSGQKDMTRADIKSKDMLEINHLKSKIGLTTERYQGFARKSNVGMKQTQFIKFNSPVTISAKDSMRIKV TASTPAIRMRNKNKLTQLAKQQTPHPNLSAIKLPAITKTKHC |
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