Gene
| Gene Model ID | pfu_aug2.0_1665.1_18458 |
|---|---|
| Locus | scaffold1665.1 : 82386 ... 94990 : + |
| To GenomeBrowser | scaffold1665.1:82386..94990 |
| Genes list of scaffold | scaffold1665.1 |
| Synonym | pfu_aug1.0_6126.1_45349 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1665.1_18458.t1 | 3 | 1 | CAP_GLY | 122 | 184 | 6.7e-35 | 118.6 | 1.3e-15 | 9.5e-12 | 44.4 |
| pfu_aug2.0_1665.1_18458.t1 | 3 | 2 | CAP_GLY | 228 | 287 | 6.7e-35 | 118.6 | 3.4e-11 | 2.5e-07 | 30.2 |
| pfu_aug2.0_1665.1_18458.t1 | 3 | 3 | CAP_GLY | 404 | 474 | 6.7e-35 | 118.6 | 3.1e-14 | 2.3e-10 | 40.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1665.1_18458.t1 | gi|524875971|ref|XP_005094707.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase CYLD-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1665.1_18458.t1 | gi|260810165|ref|XP_002599874.1| | hypothetical protein BRAFLDRAFT_230143 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1665.1_18458.t1 | gi|742223964|ref|XP_010899098.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase CYLD isoform X3 [Esox lucius] | 0.0 |
| pfu_aug2.0_1665.1_18458.t1 | gi|657816713|ref|XP_008335434.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase CYLD isoform X2 [Cynoglossus semilaevis] | 0.0 |
| pfu_aug2.0_1665.1_18458.t1 | gi|734594714|ref|XP_010727487.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase CYLD isoform X4 [Larimichthys crocea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1665.1_18458.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1665.1_18458.t1 atgtcaaaccagaatgatagttactatattctgctaaaagagaagatcgggaagaagaaagagaaaggaattcttcgtac aacttcttcaaaagtagaaattttaccgggaactcttctgtgtttaatcgacgaggaaactcgggattcgagaataatat gggtattggaaaccgtcgattctgataataatcacgtggaagtgtcgtgtgctccaaatgatacgggacagttgacttat aacgaattcagactcctgttacctattccagtatgtcaagaaagactgagtatttttcaagatcagaactggctaaaaga gggggcaagtttgatcgaaggagaacatgtattagtatcgctgaaaggtctaccggacttacccggtacaattagataca aaggagaactgccgtctagtaaagggattcagtttggtgttgaattagcaccggaacacagaggaaaaggaacttgtgat ggagtattccgtaagaaacgtttcttcacttgtgataccaacagtgcggtgtttgtggccatccacaaactacggaaaga tgttatgttttcctcacagcatagacacttggagcagaacgtctaccaaacacctcacatagacaatgacgagaggaaaa tgatcgaccagtctggtttacgaatagacaatagaatcgtttggcttagcgacaatggtcctgagtttggggtggttaag tggatcggaatcctcccagacactcatcgtagggatgtcactgtaggggtagaatttgacaatccagttggctcaggaac aggcaaatacaagaaccatcgtttatttttcgccaagccccaacatgcctcactggtaccgatcctcgggctgatgaagg cctcggagtatctgcagtccatgggagcgactaacgagagctatcctgagccagaaattgaaatgcatcctccccctgtt ataccttcacatctacaacccactcctatggattctccatatcctcctagagagcctttctctcccagaagatctatgga ggaccaaccccaaacccagggggtcaatcctctctatgagtatcagaaagcccaagattattcatcccgagttgaacctg gatcagggaaggattcgtatgaacaattagtcagtagaaatagaaacaacggatcaaaatctctacctccagccgaccct gaccttgaggtaggatctatggtagaggtcatggccaatccaccactttacggagtaatacgatggatcggaactctgcc ggatcagaaagaaccaatcaaaccaatagctgggttagaaatggaagaggaaatttcagcaggcacagacggtacttttg ggaaacataaacttttcgcttgtccaccgaaaaaagcattttttgttcctctgtacaaatgtagaaaagacaaacgtttc caggaaagtggagcaaggggcggtatgggaaataatttcggaagcatagaaactccggacgttggtggaaacatttcacc accagattctcttgatgttgaaatgattgtgaaaaacgtttgtgggaagcagaagggtattcagggtcaccataactctt gttacctggatgctacattgtttgcaatgttttattttacgactgtttttgacggtattttatatcgtcccagaacaaaa gaggatttacctgaatatgaggatgtcaaacaggttctgaaggaaggcattgttaatcctctaagaaggtataactatgt gcgagcagacaaagtgatgaaacttagacatctgcttgataagcttggaaatataccgggaatgatgaatgaagaaaaag gtcccacagcacagtataccagaaaattattccgaccaagcctggaggaagcaatgaccagggatttaagggccacagaa gttaaaataatcatttgtaatgaaaatttaaatatttggttatcatag |
|
Protein
| Protein ID | pfu_aug2.0_1665.1_18458.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1665.1_18458.t1 MSNQNDSYYILLKEKIGKKKEKGILRTTSSKVEILPGTLLCLIDEETRDSRIIWVLETVDSDNNHVEVSCAPNDTGQLTY NEFRLLLPIPVCQERLSIFQDQNWLKEGASLIEGEHVLVSLKGLPDLPGTIRYKGELPSSKGIQFGVELAPEHRGKGTCD GVFRKKRFFTCDTNSAVFVAIHKLRKDVMFSSQHRHLEQNVYQTPHIDNDERKMIDQSGLRIDNRIVWLSDNGPEFGVVK WIGILPDTHRRDVTVGVEFDNPVGSGTGKYKNHRLFFAKPQHASLVPILGLMKASEYLQSMGATNESYPEPEIEMHPPPV IPSHLQPTPMDSPYPPREPFSPRRSMEDQPQTQGVNPLYEYQKAQDYSSRVEPGSGKDSYEQLVSRNRNNGSKSLPPADP DLEVGSMVEVMANPPLYGVIRWIGTLPDQKEPIKPIAGLEMEEEISAGTDGTFGKHKLFACPPKKAFFVPLYKCRKDKRF QESGARGGMGNNFGSIETPDVGGNISPPDSLDVEMIVKNVCGKQKGIQGHHNSCYLDATLFAMFYFTTVFDGILYRPRTK EDLPEYEDVKQVLKEGIVNPLRRYNYVRADKVMKLRHLLDKLGNIPGMMNEEKGPTAQYTRKLFRPSLEEAMTRDLRATE VKIIICNENLNIWLS |
|