Gene
| Gene Model ID | pfu_aug2.0_1665.1_18460 |
|---|---|
| Locus | scaffold1665.1 : 122900 ... 136155 : - |
| To GenomeBrowser | scaffold1665.1:122900..136155 |
| Genes list of scaffold | scaffold1665.1 |
| Synonym | pfu_aug1.0_46820.1_27144 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| deoxycytidylate deaminase | GO:0004132 GO:0006220 GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1665.1_18460.t1 | 1 | 1 | dCMP_cyt_deam_1 | 134 | 248 | 1.4e-25 | 88.8 | 1.3e-29 | 2.0e-25 | 88.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1665.1_18460.t1 | gi|657591070|ref|XP_008300001.1| | PREDICTED: deoxycytidylate deaminase isoform X1 [Stegastes partitus] | 0.0 |
| pfu_aug2.0_1665.1_18460.t1 | gi|410917047|ref|XP_003971998.1| | PREDICTED: deoxycytidylate deaminase [Takifugu rubripes] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1665.1_18460.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1665.1_18460.t1 atgtcaatgctgccaactaaggaggatggacaggttgaaagaaagggggaggaatggtgttgggaagagggagagaaggg gagggggagaagggagggaagggaggaagggggcgcaggaagggtgaaagggaaggggaggacgaggggaggaaagggtt gggagggagaggaaaggggtagaggggtacccatcatagaagaagaagaagaagaagaaggtggtggtggtggcgatgat gatgatgatgatgatctacttattttcggtcgatatgaaccgtcacaccggaagttgcatttcccgcattccttcgaaat ggaaagtaaaacggagaaaaacaaggacgacgaaaaaagcactatatatccttctcaaagtaaaagacaggactatttag aatggccggactatttcatggccatagcatttttgtctgctcaaaggagtaaagatcccaaaacacaggtcggtgcttgt attgtaaatgaagaaaagaagattgttgggataggctataatggaatgccagtaggttgtgatgacgatttaatgccatg gaatagggagggagaaaacgtccttgaaactaagcgcttatatgtttgccatgctgagttgaatgctgttttgaataaga attcagccgatgtgaagaactgttccatatatgtagcactgtttccctgtaatgagtgtgctaaagtggtgatacagtcc ggcattaaggaggtcatttactactcagataaatatcatgacaaaccagagtttaaggcgtccagacgaatgatggacct cgcaggagtcaagtatagacagtatattcccaagaagaagaaaattgtgatagatttctctgtgatcgagcggcaggata gcctacaggaagttacaaacggaagtaccatggaaaacttaaaatcggggactcttagttag |
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Protein
| Protein ID | pfu_aug2.0_1665.1_18460.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1665.1_18460.t1 MSMLPTKEDGQVERKGEEWCWEEGEKGRGRREGREEGGAGRVKGKGRTRGGKGWEGEERGRGVPIIEEEEEEEGGGGGDD DDDDDLLIFGRYEPSHRKLHFPHSFEMESKTEKNKDDEKSTIYPSQSKRQDYLEWPDYFMAIAFLSAQRSKDPKTQVGAC IVNEEKKIVGIGYNGMPVGCDDDLMPWNREGENVLETKRLYVCHAELNAVLNKNSADVKNCSIYVALFPCNECAKVVIQS GIKEVIYYSDKYHDKPEFKASRRMMDLAGVKYRQYIPKKKKIVIDFSVIERQDSLQEVTNGSTMENLKSGTLS |
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