Gene
| Gene Model ID | pfu_aug2.0_1666.1_21730 |
|---|---|
| Locus | scaffold1666.1 : 20926 ... 28802 : + |
| To GenomeBrowser | scaffold1666.1:20926..28802 |
| Genes list of scaffold | scaffold1666.1 |
| Synonym | pfu_aug1.0_308.1_29190 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine threonine-protein phosphatase 6 catalytic subunit | GO:0000082 GO:0001878 GO:0004722 GO:0005515 GO:0005829 GO:0006470 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1666.1_21730.t1 | 1 | 1 | Metallophos | 46 | 237 | 2.40042e-42 | 144.6 | 0.0 | 3.00018e-42 | 144.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1666.1_21730.t1 | gi|556949538|ref|XP_005987385.1| | PREDICTED: serine/threonine-protein phosphatase 6 catalytic subunit isoform X1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_1666.1_21730.t1 | gi|584031312|ref|XP_006810106.1| | PREDICTED: serine/threonine-protein phosphatase 6 catalytic subunit-like [Neolamprologus brichardi] | 0.0 |
| pfu_aug2.0_1666.1_21730.t1 | gi|348535166|ref|XP_003455072.1| | PREDICTED: serine/threonine-protein phosphatase 6 catalytic subunit-like isoformX1 [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_1666.1_21730.t1 | gi|147906292|ref|NP_001089389.1| | protein phosphatase 6, catalytic subunit [Xenopus laevis] | 0.0 |
| pfu_aug2.0_1666.1_21730.t1 | gi|21312758|ref|NP_077171.1| | serine/threonine-protein phosphatase 6 catalytic subunit [Mus musculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1666.1_21730.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1666.1_21730.t1 atgaaagcggacgttgatagatggattgaaattgccaaagagtgcaagtacttacctgaaaatgacttgaagaaactatg tgatatggtatgtgagcttttgttggaagaatccaatgtccagccagtgtccacaccggtcactgtgtgtggagatatcc atggacagttttacgacttgatggaacttttccgtactggtggccaatgtccagacacaaattatattttcatgggagat tttgttgacagaggctattatagtttagagacattcaccctgttactcacactgaaagcaaggtggccagacagaataat attgttacggggaaatcatgaaagtagacagattacacagatatatggattttatgatgaatgtcagacaaagtacggga atgccaatgcctggcgctgctgtaccaaagtgtttgatttactcacagtagctgctattatagatgagtgcgttctatgt gtccatggtggtttatccccagatataaagacgatagatcagattcgtaccatagaaaggaaccaagaaatacctcacaa aggagccttctgtgatttggtatggtctgaccctgaggatgtggacacatgggccattagtccccggggagcaggatggc tgtttggtgccaaggtcacaaacgagtttgtccacatcaacaacttaaagttgatatgtagagcacaccagcttgtccat gaaggttttaagtacatgtttgatgagaagctagtaacagtatggtccgctccaaattactgctacagatgtggaaatat agcagctgttctcgctttttcggatgctaacaccaaagacgccaaactttttagtgccgtgccggacaatgaacgagtca tacctccaaggacaactacgccttacttcctgtaa |
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Protein
| Protein ID | pfu_aug2.0_1666.1_21730.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1666.1_21730.t1 MKADVDRWIEIAKECKYLPENDLKKLCDMVCELLLEESNVQPVSTPVTVCGDIHGQFYDLMELFRTGGQCPDTNYIFMGD FVDRGYYSLETFTLLLTLKARWPDRIILLRGNHESRQITQIYGFYDECQTKYGNANAWRCCTKVFDLLTVAAIIDECVLC VHGGLSPDIKTIDQIRTIERNQEIPHKGAFCDLVWSDPEDVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVH EGFKYMFDEKLVTVWSAPNYCYRCGNIAAVLAFSDANTKDAKLFSAVPDNERVIPPRTTTPYFL |
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