Gene
| Gene Model ID | pfu_aug2.0_1666.1_21734 |
|---|---|
| Locus | scaffold1666.1 : 114706 ... 126075 : - |
| To GenomeBrowser | scaffold1666.1:114706..126075 |
| Genes list of scaffold | scaffold1666.1 |
| Synonym | pfu_aug1.0_308.1_29184 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1666.1_21734.t1 | 9 | 1 | Sushi | 75 | 123 | 0.0 | 262.1 | 1.0e-13 | 4.9e-10 | 39.5 |
| pfu_aug2.0_1666.1_21734.t1 | 9 | 2 | Sushi | 135 | 194 | 0.0 | 262.1 | 1.4e-11 | 6.7e-08 | 32.7 |
| pfu_aug2.0_1666.1_21734.t1 | 9 | 3 | Sushi | 199 | 253 | 0.0 | 262.1 | 3.7e-13 | 1.9e-09 | 37.7 |
| pfu_aug2.0_1666.1_21734.t1 | 9 | 4 | Sushi | 259 | 312 | 0.0 | 262.1 | 1.7e-14 | 8.5e-11 | 42.0 |
| pfu_aug2.0_1666.1_21734.t1 | 9 | 5 | Sushi | 317 | 370 | 0.0 | 262.1 | 3.4e-12 | 1.7e-08 | 34.6 |
| pfu_aug2.0_1666.1_21734.t1 | 9 | 6 | Sushi | 388 | 429 | 0.0 | 262.1 | 8.0e-10 | 4.0e-06 | 27.0 |
| pfu_aug2.0_1666.1_21734.t1 | 9 | 7 | Sushi | 450 | 487 | 0.0 | 262.1 | 4.4e-09 | 2.2e-05 | 24.7 |
| pfu_aug2.0_1666.1_21734.t1 | 9 | 8 | Sushi | 492 | 549 | 0.0 | 262.1 | 4.6e-10 | 2.3e-06 | 27.8 |
| pfu_aug2.0_1666.1_21734.t1 | 9 | 9 | Sushi | 554 | 621 | 0.0 | 262.1 | 8.1e-11 | 4.0e-07 | 30.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1666.1_21734.t1 | gi|676440125|ref|XP_009049073.1| | hypothetical protein LOTGIDRAFT_225988 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1666.1_21734.t1 | gi|524871688|ref|XP_005092615.1| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1666.1_21734.t1 | gi|675870162|ref|XP_009020641.1| | hypothetical protein HELRODRAFT_174963 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_1666.1_21734.t1 | gi|242009433|ref|XP_002425490.1| | c4b-binding protein beta chain, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_1666.1_21734.t1 | gi|391336501|ref|XP_003742618.1| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Metaseiulus occidentalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1666.1_21734.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1666.1_21734.t1 atgaggcagaaaaacatctatcttctggtattggtttgtttactccctacaggttggtgtttaaacgagggttgcaaacc acgccaggatggcattcgatcttgttcaaagtcatgtgccagggagaactgtaagagtgccaggaaagagtgtctctgtg acggagtatgcggactcagctgtatcaataaaaacatgagatgtgtgaatttgggaaggaggatacctaatggacgtgtt aacattgtacctttcaataagttcggggctgtggctaagtacacgtgtaatgacggatatgagttaaagggtctggcaat aagggtgtgtcaggggaacgaggagtggagcggacaggaaccacggtgtgtcctcaccaccagagtaccggataagacag agtgcggtcgccctccagatgttgccaatgcagatttctatcagaatcgaggtaacagtacctacccacttgggacgatg cttgagtatacatgtagagatggatttcagaagggtaaaaatgacgcagataaagcatggtgtgttggaatgggaacctg ggtaggaccaagaatgaaatgctacactgcgggatgtccaaaaccttctccaattgaaaatggcgggattaaagaaccat ttgtaaatggagttggtgccatcatgacatactactgtgtaccgggtttccatcttgcaggacgacctacaagagagtgt cgtccgtcaggagtctgggatggcaaagaaccaagctgtgaaaaagctgtaaattgtggttttcccggagagttggacaa tggttggcgttccggacacattttccactatccggagagtatacagtatcactgtcatgaaggctacgaactccggggtt ctccaaatagaacctgccagcctaacgccgaatggtccggattaccaccaacttgtcacgctgtggattgcccaatctta caggctcccgctaacggtaccatgataggagtaggcaatgcttttggtacagtgatccagttcaaatgtaaaggaaactt ccatttgagtggctctgaggagcgcaggtgtcaggcaaacagaacctggagcggaacggcggcaacatgcagtgaaatta agtgtgaatggccgaataaattttggaatggttatgttctcggagagaaaacacacgtgggatctacagtatttttcagc tgtcgtgtacgtactaagtttgttggcgattactttgatgcaacttgtttgccgaatggcacgtggtcacacccacaacc aacatgctggggacaatgtcaagttccatcaattgagaaggctatattagaaggtgtacgccagggaacctggagggacc acggcacgggcctgagatatcaatgtgtagatggctttgttccccagacctccaaacaactgatgtgtaataatggtacc tggtctgacctgcctcagtgtgtaccagctccctgtcgagatatccctcctcccatcaacaacggcctgaggatatacac aggtcggcagaatggcagaaaagcaaagtatatatgtctgaatgggtatcgcttagccgggatggacgtagataatgcta ccctgatctgccagcagggtacttggataggaggagcaccgcgatgtgaacaagtttactgtccaaatccaggagaaata gagcatggaaaaatatataaacttgaaaacgacaacagcagatttgagtttaaaacttacatacatgaaattgagcacgg ccagcgtctcggattcgaatgcaatattggatacacattacgtggtgttagcggtgccacctgtattgatgggacatgga acccaccgctacagtcacactgcgaggaagctcaccatttacctttccccccttggtggcatccaatatctaatgttaat taccatgtcaaataa |
|
Protein
| Protein ID | pfu_aug2.0_1666.1_21734.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1666.1_21734.t1 MRQKNIYLLVLVCLLPTGWCLNEGCKPRQDGIRSCSKSCARENCKSARKECLCDGVCGLSCINKNMRCVNLGRRIPNGRV NIVPFNKFGAVAKYTCNDGYELKGLAIRVCQGNEEWSGQEPRCVLTTRVPDKTECGRPPDVANADFYQNRGNSTYPLGTM LEYTCRDGFQKGKNDADKAWCVGMGTWVGPRMKCYTAGCPKPSPIENGGIKEPFVNGVGAIMTYYCVPGFHLAGRPTREC RPSGVWDGKEPSCEKAVNCGFPGELDNGWRSGHIFHYPESIQYHCHEGYELRGSPNRTCQPNAEWSGLPPTCHAVDCPIL QAPANGTMIGVGNAFGTVIQFKCKGNFHLSGSEERRCQANRTWSGTAATCSEIKCEWPNKFWNGYVLGEKTHVGSTVFFS CRVRTKFVGDYFDATCLPNGTWSHPQPTCWGQCQVPSIEKAILEGVRQGTWRDHGTGLRYQCVDGFVPQTSKQLMCNNGT WSDLPQCVPAPCRDIPPPINNGLRIYTGRQNGRKAKYICLNGYRLAGMDVDNATLICQQGTWIGGAPRCEQVYCPNPGEI EHGKIYKLENDNSRFEFKTYIHEIEHGQRLGFECNIGYTLRGVSGATCIDGTWNPPLQSHCEEAHHLPFPPWWHPISNVN YHVK |
|