Gene
| Gene Model ID | pfu_aug2.0_1668.1_28452 |
|---|---|
| Locus | scaffold1668.1 : 55336 ... 72291 : + |
| To GenomeBrowser | scaffold1668.1:55336..72291 |
| Genes list of scaffold | scaffold1668.1 |
| Synonym | pfu_aug1.0_1894.1_22783 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1668.1_28452.t1 | 5 | 1 | RCC1_2 | 15 | 23 | 1.5e-16 | 59.4 | 0.13 | 370.0 | 0.8 |
| pfu_aug2.0_1668.1_28452.t1 | 5 | 1 | RCC1 | 17 | 77 | 7.4e-30 | 102.9 | 2.9e-09 | 8.6e-06 | 25.8 |
| pfu_aug2.0_1668.1_28452.t1 | 5 | 2 | RCC1_2 | 64 | 97 | 1.5e-16 | 59.4 | 0.00041 | 1.2 | 8.8 |
| pfu_aug2.0_1668.1_28452.t1 | 5 | 2 | RCC1 | 86 | 145 | 7.4e-30 | 102.9 | 0.00024 | 0.72 | 10.1 |
| pfu_aug2.0_1668.1_28452.t1 | 5 | 3 | RCC1_2 | 134 | 161 | 1.5e-16 | 59.4 | 4.0e-08 | 0.00012 | 21.5 |
| pfu_aug2.0_1668.1_28452.t1 | 5 | 3 | RCC1 | 150 | 200 | 7.4e-30 | 102.9 | 1.0e-06 | 0.003 | 17.7 |
| pfu_aug2.0_1668.1_28452.t1 | 5 | 4 | RCC1_2 | 188 | 217 | 1.5e-16 | 59.4 | 1.4e-08 | 4.3e-05 | 23.0 |
| pfu_aug2.0_1668.1_28452.t1 | 5 | 4 | RCC1 | 204 | 254 | 7.4e-30 | 102.9 | 1.8e-08 | 5.3e-05 | 23.3 |
| pfu_aug2.0_1668.1_28452.t1 | 5 | 5 | RCC1_2 | 241 | 270 | 1.5e-16 | 59.4 | 2.7e-05 | 0.079 | 12.6 |
| pfu_aug2.0_1668.1_28452.t1 | 5 | 5 | RCC1 | 257 | 302 | 7.4e-30 | 102.9 | 5.1e-08 | 0.00015 | 21.8 |
| pfu_aug2.0_1668.1_28452.t1 | 2 | 1 | Lipocalin_2 | 338 | 414 | 3.9e-39 | 133.7 | 1.4e-16 | 4.1e-13 | 49.3 |
| pfu_aug2.0_1668.1_28452.t1 | 2 | 1 | Lipocalin | 343 | 380 | 7.6e-19 | 68.1 | 5.6e-05 | 0.17 | 11.8 |
| pfu_aug2.0_1668.1_28452.t1 | 2 | 2 | Lipocalin_2 | 437 | 582 | 3.9e-39 | 133.7 | 1.1e-26 | 3.2e-23 | 82.0 |
| pfu_aug2.0_1668.1_28452.t1 | 2 | 2 | Lipocalin | 443 | 584 | 7.6e-19 | 68.1 | 5.7e-18 | 1.7e-14 | 54.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1668.1_28452.t1 | gi|676484394|ref|XP_009063332.1| | hypothetical protein LOTGIDRAFT_204579 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1668.1_28452.t1 | gi|524907398|ref|XP_005108817.1| | PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein homolog isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1668.1_28452.t1 | gi|260804625|ref|XP_002597188.1| | hypothetical protein BRAFLDRAFT_276208 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1668.1_28452.t1 | gi|675864234|ref|XP_009017677.1| | hypothetical protein HELRODRAFT_79114 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_1668.1_28452.t1 | gi|683935869|ref|XP_009096954.1| | PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein [Serinus canaria] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1668.1_28452.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1668.1_28452.t1 atgggaagtaactctgtaaaacaaagtgaaaatgccaaacgtgccaacagggtgtatgtgtggggatgttccgccaccgg tgcacttggtatatcgtcttatttaaggacagaggaaaaaggtcagaaagttcttctgcaaatgaggcgaccttccagat tgcggttcatggacgaaaataacctagaggtcaaggacgttgactgcggttatggttttacgctaatgatatgtaaggaa ggaggtaagggacttcaactttacgggacggggattaatacagactctcagttaggatttcatgaatatccaaagaatac tggtagatttctggattatattattcagcctgtacctataaaattgccgctacacactccagattccaccaagttgttgg ccgtcgcaggcggcagggcacacactttggtgcttacagacacagaaggtgtcttcagtcttggaaacaattcatatgga cagtgcggaagacctattgtggagggagaatggtatcgtggaagtgacatcatccatagaatacggcaccttccctacgg tatcgaggatattgtttgcggtcaggatcattcttttttcatgacaacttctggtgaaatctatagctgtggtcttggcg cagatggacagactggtctggaacattacaaactgacacacgaaccaacgctagtgaagggagatatacaaggcgaaaaa atcatacaggtctcatcaagtgccgattgtgttttagcagtgtctgataagggggatgtgtttggatggggaaattcaga atatcatcaatttgcatctatcactgaggaaacgcaagtcaacgttccccgtcatatgaatacaaagcattgtgggaaga taatccaggtggcagcagcaggatcaaagtgcgcaattctaaagagaaaggacagatctacagagattgatactgaaaaa tgtttgcgcgcgtcagggtttgcatacgtcaaggacgaaggacagtgtgttgtatcccaatatttgggaacatggtacga agtctacaaattcaaggcaaacttcgaaaacaacgaaaaatgtatccaggccaattaccaactgaaacccgacggtcaca tcagagtcaataacactggagtttctataaccgattccactccaagcacagctattggtgatatttacattccagatatg actgatgggtcaaaattgaaggtcaaatttgcatcagccctcgctgttagtaatgctcaggttttcggagggttaggatg ccctactgttaccactcagaagaacttcaaccttactcgttatttgggaacatggtacgaagtctacaaattcaaggcaa acttcgaaaacaacgaaaaatgtatccaggccaattaccaactgaaacccgacggtcacatcagagtcaataacactgga gtttctataaccgattccactccaagcacagctattggtgatatttacattccagatatgactgatgggtcaaaattgaa ggttaaatttgcatcagctgccccctatggtaattactgggtgttgagcacagactacgaaaactacacattaatctact cctgtacaagcatactcggcatcagccattttgaatttggatggattttggcgcgacagaggactctcccggacgcaacc atcaataaactatttgccattacacaaggattcaaaatcgatacaagccattttatgaaaaccgatcaaagcaattgtta g |
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Protein
| Protein ID | pfu_aug2.0_1668.1_28452.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1668.1_28452.t1 MGSNSVKQSENAKRANRVYVWGCSATGALGISSYLRTEEKGQKVLLQMRRPSRLRFMDENNLEVKDVDCGYGFTLMICKE GGKGLQLYGTGINTDSQLGFHEYPKNTGRFLDYIIQPVPIKLPLHTPDSTKLLAVAGGRAHTLVLTDTEGVFSLGNNSYG QCGRPIVEGEWYRGSDIIHRIRHLPYGIEDIVCGQDHSFFMTTSGEIYSCGLGADGQTGLEHYKLTHEPTLVKGDIQGEK IIQVSSSADCVLAVSDKGDVFGWGNSEYHQFASITEETQVNVPRHMNTKHCGKIIQVAAAGSKCAILKRKDRSTEIDTEK CLRASGFAYVKDEGQCVVSQYLGTWYEVYKFKANFENNEKCIQANYQLKPDGHIRVNNTGVSITDSTPSTAIGDIYIPDM TDGSKLKVKFASALAVSNAQVFGGLGCPTVTTQKNFNLTRYLGTWYEVYKFKANFENNEKCIQANYQLKPDGHIRVNNTG VSITDSTPSTAIGDIYIPDMTDGSKLKVKFASAAPYGNYWVLSTDYENYTLIYSCTSILGISHFEFGWILARQRTLPDAT INKLFAITQGFKIDTSHFMKTDQSNC |
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