Gene
| Gene Model ID | pfu_aug2.0_1668.1_28453 |
|---|---|
| Locus | scaffold1668.1 : 72294 ... 96025 : - |
| To GenomeBrowser | scaffold1668.1:72294..96025 |
| Genes list of scaffold | scaffold1668.1 |
| Synonym | pfu_aug1.0_1894.1_22784 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1668.1_28453.t1 | 1 | 1 | CRAL_TRIO | 32 | 162 | 2.0e-23 | 82.6 | 1.1e-26 | 5.2e-23 | 81.2 |
| pfu_aug2.0_1668.1_28453.t1 | 1 | 1 | ABC1 | 398 | 513 | 1.3e-35 | 121.9 | 7.8e-39 | 3.8e-35 | 120.4 |
Transcript
| Transcript ID | pfu_aug2.0_1668.1_28453.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1668.1_28453.t1 atgcatgtgtccaccggggtttcaattcatgtgtcaaacggggtttcgacacttcatctagacaatgcattaaatgttat caccagacaggtgggatttgacgagagtaagcgcccagtaatttatgctaactttgcccaagctagtattcaccgtaaca ctgttgaagactccgtaacgcatgtcacgtatttgtttgagaacgccaagtttactatggctcccggagtcacaacttgg gtgatcgtcatcgattgtacaggcataaatctcccaagctgtaaccctaaacttggatacgaggtaacgcaggttatggc aaaccactacccagaacgactaggtatggtgatatgtctcaaccacaacccaatgtttcaagctgtatggaacgcagtaa aggtcttccttcacaaaaatactgtggcgaaaatgaaattagttcgtacaaagacaaagtacattccgttatttcagaaa tatttcccggacgaacttacggattggcttatagaggaaattaagcggaataaacagactccgttaccggcatcgcaatg tgcattctgggaaaaaccggaaatagaatcggatcacgatcctagaggttgtccgtcgtacgtcaaaaactatgtagaaa cgtacgcacgatcggacagcaaaaatgttcataaaccacatcctaatattattgatgccgtgaaaggaagcatcaaaacg aacacgcatgtgagtgaagttattcacaaggaaagtaaatctcacgtgaaagaagtgggcggagctaatggagccgagta tagcgatcacagcgaagaggaaccggaaatagactcatcagattccgtagaaatcggaaaggaatatcagattccaatgg acgccaaaagaatatcagcggcgacatcgtttataataggatctataatatcagccgattataaatacaatctatggggg ctggatgagatgtcagaagaatatgccgaagccattcatccctgccaccagagggcagcacagagactactgaagggctg ccttaaaaacggaggactttacataaagcttggacagggtctggtgtccatgaatcatatactgccaaaggaatatctag aaacgctagtctgtctacaagataaagctctcagcagaggacctcatgagatagaacagttatttttggaagacttcgat caaatacctcaggaatatttcaaacattttgaagaaactccaatagcagcggcaagtttagctcaggttcatagagcggt aacacatgaagggcaagaagtagctgtaaaggtacagtacatagatttacgggaccgttttgctggagacatcaggactt gtgaaatcttactcaaattaataggctgggtacatcctaaatttgactttgcttgggctttacaggacttaaaagagact cttgctcaagagttagactttgagaatgagggaaggaatggtgagagatgtcagagagacttaaaacatctcccctatgt atatgtgccaaaagttcattgggagaaaactagtaagagagttttaaccactgagtatatagatggatgtaaaataagca ataaggaagcaataaaatccatgggtctctcattatttgatatagacatgaagctagtacgggcattttctgaccagata tttttgcatggatttgtccatgcggatccccatccaggcaatgtgtttattcggaaggatgaaaacggtaaagcggagct tgtcttacttgaccatgggttgtatgataaattgacccccacccaccgacaggccctgtgttctatgtataaatctattg tgatgcaggacgatgacggaatggagaaatcctctaatgatttaggagtacaagatgccgcattgtttggagaaatctta gtccaacgtcctattactcgtaaaactttggtgctacctagtaaaatgacaaaagaagatctacatcacatgaaagttat ggcccagcaacattttgacttgattatgcaagcgcttaaagaaatgcctaggccccttctcttaatcataaggaacatga ataccattagagcgatttgtcaggatcatggtaatattatagacagatactcggtaatggctcgaagtgctatacgagga tcgaggaaacagggtgctgcagagatgacatatatgggtcgatttaaggcgtggtgtgagttagtacattatgatttcca attaatgaaggagagatggaagatatggtttgccgtagttactgtacgtgtattacaatatctaggacgtattcccaaag aattagacgaagtcatgaagaaagaaaaatcaagatacgacacgatatga |
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Protein
| Protein ID | pfu_aug2.0_1668.1_28453.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1668.1_28453.t1 MHVSTGVSIHVSNGVSTLHLDNALNVITRQVGFDESKRPVIYANFAQASIHRNTVEDSVTHVTYLFENAKFTMAPGVTTW VIVIDCTGINLPSCNPKLGYEVTQVMANHYPERLGMVICLNHNPMFQAVWNAVKVFLHKNTVAKMKLVRTKTKYIPLFQK YFPDELTDWLIEEIKRNKQTPLPASQCAFWEKPEIESDHDPRGCPSYVKNYVETYARSDSKNVHKPHPNIIDAVKGSIKT NTHVSEVIHKESKSHVKEVGGANGAEYSDHSEEEPEIDSSDSVEIGKEYQIPMDAKRISAATSFIIGSIISADYKYNLWG LDEMSEEYAEAIHPCHQRAAQRLLKGCLKNGGLYIKLGQGLVSMNHILPKEYLETLVCLQDKALSRGPHEIEQLFLEDFD QIPQEYFKHFEETPIAAASLAQVHRAVTHEGQEVAVKVQYIDLRDRFAGDIRTCEILLKLIGWVHPKFDFAWALQDLKET LAQELDFENEGRNGERCQRDLKHLPYVYVPKVHWEKTSKRVLTTEYIDGCKISNKEAIKSMGLSLFDIDMKLVRAFSDQI FLHGFVHADPHPGNVFIRKDENGKAELVLLDHGLYDKLTPTHRQALCSMYKSIVMQDDDGMEKSSNDLGVQDAALFGEIL VQRPITRKTLVLPSKMTKEDLHHMKVMAQQHFDLIMQALKEMPRPLLLIIRNMNTIRAICQDHGNIIDRYSVMARSAIRG SRKQGAAEMTYMGRFKAWCELVHYDFQLMKERWKIWFAVVTVRVLQYLGRIPKELDEVMKKEKSRYDTI |
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