Gene
| Gene Model ID | pfu_aug2.0_1668.1_28455 |
|---|---|
| Locus | scaffold1668.1 : 113826 ... 121222 : + |
| To GenomeBrowser | scaffold1668.1:113826..121222 |
| Genes list of scaffold | scaffold1668.1 |
| Synonym | pfu_aug1.0_95978.1_71449 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1668.1_28455.t1 | 1 | 1 | BTB_2 | 414 | 501 | 1.7e-14 | 53.7 | 3.3e-18 | 5.0e-14 | 52.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1668.1_28455.t1 | gi|470416510|ref|XP_004336893.1| | K+ channel tetramerisation subfamily protein [Acanthamoeba castellanii str. Neff] | 3.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_1668.1_28455.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1668.1_28455.t1 atgtctggactggtagatctaaaatacctattagatcaagggaaaaggatagaaggaaaatgttaccatctagcaaaact ctacgaaacaagatgcgaggatccaaattcttgtgaaaaaaagaaatctaactggtggtgctgcgatgaacattatagaa aaatgcctttcagtaaagcggaaaaaaccttaatcgcacatgtgaaatcagttataaaggatgttgaaaaacatccggac aatataatagaagagtttacaattggtaaaacttatgtcggcgttaatcttacgagtgattacttttcacctgaccaacc aagcacttgggatgcaaaatgtgaaggaatagatagacgatggaaagattataaaaatgacggttatcactgtctagtag tgatatgttgcattacaaaggaaataccagaacagcgaataaatgaaaagaacaacgtgtttccaatagaccaagaacaa tttgcccttgtcatggaacagaagttgattcattattttagacttgcgaagcctaatagcaaactcggaaataaatcttt cgctacaggaaaaggacaagatactccacttagaggaggaatcgtttacgttgcattcaaatttaaaaaggacggaggaa atgtttcacaaatttccgacaaaccaataaagaacaccagaagaggcagcggagacagaagaagtttgcaaacaaatcaa atagccaaaaagacgaaagcagataaaacgcgaaagaaaaagctcaagaaagtattcaaatcaaagcctatatgcagtac agactcgtcttcctccgagtcccagatttcgacaagttccaagggagaaaaagaaacatcaaacgtatcggaaaaggatg aaactttaacggatcaggtgtcggcaaatgtaatgtcagtggaagaggactctgcaacatcaaacgaagaaggaaaggat aaggcatcaatggagcagtttttgtcaaatgatagtgagcatgatgatggtaggaccaaagaaccaagaaagaaaaggga aagaatggagtcatcattaccatctgactcattttcatcttcaatagccataacaacggttggattaggtccttccgact cgagcaccactccagcagcgtattatgatacagcagtagatggaactatacctggactcaccaacgaggatcgagacact atgacatacattaatacctgtgcagagcagaaagctatattaaacatcggaggagattatttccacacaagtattccaac tttaaaatcagttccagattcgttattttgtaaaatgctttacaaaggttcaccctttgagagaaagcttccagacttca tagacagggacccaaaacattttcgtataatccttaattatcttcgagatagcgggaaaatggacacagagatgctacca aataatatgagacaactgtatgaattgcgatcagaggcagtttactatcagctgcatgatttgattaggattgtaaattt tcgtatttcgaatctttttcctttcgaagctcgaacgaatgaaacattatcataa |
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Protein
| Protein ID | pfu_aug2.0_1668.1_28455.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1668.1_28455.t1 MSGLVDLKYLLDQGKRIEGKCYHLAKLYETRCEDPNSCEKKKSNWWCCDEHYRKMPFSKAEKTLIAHVKSVIKDVEKHPD NIIEEFTIGKTYVGVNLTSDYFSPDQPSTWDAKCEGIDRRWKDYKNDGYHCLVVICCITKEIPEQRINEKNNVFPIDQEQ FALVMEQKLIHYFRLAKPNSKLGNKSFATGKGQDTPLRGGIVYVAFKFKKDGGNVSQISDKPIKNTRRGSGDRRSLQTNQ IAKKTKADKTRKKKLKKVFKSKPICSTDSSSSESQISTSSKGEKETSNVSEKDETLTDQVSANVMSVEEDSATSNEEGKD KASMEQFLSNDSEHDDGRTKEPRKKRERMESSLPSDSFSSSIAITTVGLGPSDSSTTPAAYYDTAVDGTIPGLTNEDRDT MTYINTCAEQKAILNIGGDYFHTSIPTLKSVPDSLFCKMLYKGSPFERKLPDFIDRDPKHFRIILNYLRDSGKMDTEMLP NNMRQLYELRSEAVYYQLHDLIRIVNFRISNLFPFEARTNETLS |
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