Gene
| Gene Model ID | pfu_aug2.0_167.1_23601 |
|---|---|
| Locus | scaffold167.1 : 408121 ... 409080 : - |
| To GenomeBrowser | scaffold167.1:408121..409080 |
| Genes list of scaffold | scaffold167.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_167.1_23601.t1 | 1 | 1 | HLH | 15 | 64 | 3.2e-11 | 42.7 | 1.0e-14 | 5.0e-11 | 42.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_167.1_23601.t1 | gi|118343673|ref|NP_001071656.1| | transcription factor protein [Ciona intestinalis] | 1.0e-07 |
| pfu_aug2.0_167.1_23601.t1 | gi|704300865|ref|XP_010162829.1| | PREDICTED: achaete-scute homolog 4-like [Caprimulgus carolinensis] | 2.0e-07 |
| pfu_aug2.0_167.1_23601.t1 | gi|556957200|ref|XP_005989731.1| | PREDICTED: achaete-scute homolog 3 [Latimeria chalumnae] | 3.0e-07 |
| pfu_aug2.0_167.1_23601.t1 | gi|585702103|ref|XP_006897611.1| | PREDICTED: achaete-scute homolog 4 [Elephantulus edwardii] | 4.0e-07 |
| pfu_aug2.0_167.1_23601.t1 | gi|545222875|ref|XP_005612214.1| | PREDICTED: transmembrane protein 9B-like isoform X3 [Equus caballus] | 7.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_167.1_23601.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_167.1_23601.t1 atgaaaacttcagaaaaggcaaaggacaaaggcactgctcaggaagctcgaaatgctagagagagaaagagggttaaaac gatcaatgaatggctgtttgttctgaagaatatgcttccagatgagtggatgagcaaaaatatgagcaagctcgaaatta taaggaaatctagaatgtatattcagcgactacatgagatgttggagacaagcacaaggactgtatcaacagtcaagaca tttagcaccatagctgaaacacaaggagagacaataagcccaatagaagatacacgagacaaagcattgggtacagtgac agtaacagagggctggacagttagtaaaatgggagaaacacgagacaaggcattgagtacagtgacagtaacagagggcg ggactgttagtgcaattggagaaacacgagacaaggcattgagcacagtaccagtagcagaaggcgggtcaactggcgaa agtacagaaatagaaggcagcataccatggtcaagaaaagatatagcaggagggtcagatgatacaaatttcagtgatga aacaatgacaaaattattcgatagtattgagtcaagcgatagcataaatctatgtggcattctgagtccaggtagctttg atgaacttttaaaagatgataaaccgtataataattactgtgtccagctccaagatactgaatttattgacggttttgca gatgaagaattcccattttttgatgacgcatttctctttggctag |
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Protein
| Protein ID | pfu_aug2.0_167.1_23601.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_167.1_23601.t1 MKTSEKAKDKGTAQEARNARERKRVKTINEWLFVLKNMLPDEWMSKNMSKLEIIRKSRMYIQRLHEMLETSTRTVSTVKT FSTIAETQGETISPIEDTRDKALGTVTVTEGWTVSKMGETRDKALSTVTVTEGGTVSAIGETRDKALSTVPVAEGGSTGE STEIEGSIPWSRKDIAGGSDDTNFSDETMTKLFDSIESSDSINLCGILSPGSFDELLKDDKPYNNYCVQLQDTEFIDGFA DEEFPFFDDAFLFG |
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