Gene
| Gene Model ID | pfu_aug2.0_1670.1_01758 |
|---|---|
| Locus | scaffold1670.1 : 1 ... 6305 : - |
| To GenomeBrowser | scaffold1670.1:1..6305 |
| Genes list of scaffold | scaffold1670.1 |
| Synonym | pfu_aug1.0_5138.1_67175 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1670.1_01758.t1 | 1 | 1 | Fibrinogen_C | 122 | 244 | 8.6e-27 | 94.2 | 8.0e-31 | 1.2e-26 | 93.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1670.1_01758.t1 | gi|551527609|ref|XP_005815277.1| | PREDICTED: microfibril-associated glycoprotein 4-like [Xiphophorus maculatus] | 5.0e-26 |
| pfu_aug2.0_1670.1_01758.t1 | gi|658923141|ref|XP_008401283.1| | PREDICTED: microfibril-associated glycoprotein 4-like [Poecilia reticulata] | 3.0e-25 |
| pfu_aug2.0_1670.1_01758.t1 | gi|551520915|ref|XP_005811948.1| | PREDICTED: angiopoietin-2-like [Xiphophorus maculatus] | 1.0e-24 |
| pfu_aug2.0_1670.1_01758.t1 | gi|348523884|ref|XP_003449453.1| | PREDICTED: microfibril-associated glycoprotein 4-like [Oreochromis niloticus] | 1.0e-24 |
| pfu_aug2.0_1670.1_01758.t1 | gi|734599924|ref|XP_010755020.1| | PREDICTED: angiopoietin-2 [Larimichthys crocea] | 2.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_1670.1_01758.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1670.1_01758.t1 atgctctgtgatagcgcatcaaagaagggaggggatctccaacaagaccctgttgcagcaccaacagcaaaacatcaaac cacccgatgcaaaatcacaaaagacgagcatagtatgagacggaaaagagacatacgacatgctaacatcaaacacaaaa gactacacataaaccgacgagaccaatgggcaacaggcgccgacttcggacggccatttactacgcatgtagctaatgat gtggttatcctggattacttgcgcaaaaccatcccatttctccaattacccagaggtctcgaagaacgcatatcaaacgt caatggtgatctacgtcccaatgaagaacctggcatagaaagacctcaagattgcaaggctctttattccatcaactcga ctctccctaacggtgtttatgatatttttccatccgccaacgaagcagttgctgcattttgcgatatggaaagtagcggc tggactgtctttcaaagaaggtttaccggtgaaacagatttttatagaggctggcaagaatataggaatggatttggtag tccctctggagagtactggctaggtaacaagtatcttcatcacatcaccaaaggcaaattctgcattttgttaatagaga tgatggatactttaagaaactcaagttggaacaccgaattcttcgactttaatattgacaatgaaacagagggattccgg attagtttcagccaatcgtacgacatcttag |
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Protein
| Protein ID | pfu_aug2.0_1670.1_01758.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1670.1_01758.t1 MLCDSASKKGGDLQQDPVAAPTAKHQTTRCKITKDEHSMRRKRDIRHANIKHKRLHINRRDQWATGADFGRPFTTHVAND VVILDYLRKTIPFLQLPRGLEERISNVNGDLRPNEEPGIERPQDCKALYSINSTLPNGVYDIFPSANEAVAAFCDMESSG WTVFQRRFTGETDFYRGWQEYRNGFGSPSGEYWLGNKYLHHITKGKFCILLIEMMDTLRNSSWNTEFFDFNIDNETEGFR ISFSQSYDIL |
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