Gene
| Gene Model ID | pfu_aug2.0_1670.1_01759 |
|---|---|
| Locus | scaffold1670.1 : 26546 ... 28629 : + |
| To GenomeBrowser | scaffold1670.1:26546..28629 |
| Genes list of scaffold | scaffold1670.1 |
| Synonym | pfu_aug1.0_2454.1_37275 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1670.1_01759.t1 | 1 | 1 | RVT_1 | 146 | 394 | 2.89999e-41 | 141.1 | 7.00649e-45 | 5.29999e-41 | 140.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1670.1_01759.t1 | gi|390339252|ref|XP_003724962.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1670.1_01759.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1670.1_01759.t1 atgacccgcaacatagctgtatggagaggttctggacatacacaaagttttatatccagcaagaagactgagagcacagg tgttgcaccacttaaatcaagtgacggtctcacatactcggaccaagcaacaaaagctaacatccttaacgaacagttct cttcagtcttcaatgccaacgaagatttaacaatcgaagacattaaatcaccaccatactcacctatgcctgatatagag ataagcaccagaggtgtccagaagttgctagctggtctcaacatacacaaagcatcaggaccagatggagtctcaactag gctattgaagtccttctcctcagagctagcccccgtcttctccttgctgttccaggcttcacttgaccagggtactttac cacaagactggaagaaggcagatgtgacaccaatatacaagaagggtatgaaaaactgtgcagcaaactacaggcccgta tccctgacatctgtggtatgcaaatctatggagcacataatctgcagtaacattatgcgacactgcgacaaccataatgt attgacagatgctcagcatggcttcaggaagcgcaggtcatgtgagacccaactagtcatcactctccaggaccttgcgg gtaacatcgaccacaaaggccagacggatatcattctcttagacttctcgaaaacctttgataaggtgccacaccagaga ttgctgcgcaagttacaacattacggtataagaggacacacacataaatggatcttagacttcctccaaggacgtgaaca gagggtggttctaggcggatgctcgtcaaggatcgcacctgttacctccggggtgccccagggtagtgttctcggaccgc tcctgttcctcctatatataaatgaccttcccaactacatcagcaaccattcaacagtgcgactctttgcagatgactgc atactgtatagggatatacgatcacccactgatgctagtctactccaagaagacctggattgtctgcaaagatgggaaca agattggctgatggaatttcacccacacaagtgtcaggtcattcatgtcaccaccaagagagcacccatcagagtaccat ataatatccatggtcatcagctggaggaagcagaatcagcaaaatacttagggcttatcatccaccacaaactagactgg aacacccatataggaagtacatgcaaaaaggccaactccaccagagccttcctacagaggaacatctccaagtgcccaac caagatcaaggccttatgttacaccaccctggtacgcccagtgatggaatatgggagcatcatatgggacccccatacgg cctataacatcagacaattggagatggtccagcgtagatcagccaggttcgtcatgggtgactatcataccactagtagt gtatcccctatgatgaccacactccattggcagacactacaggagcgtcgggcacaggccaagatgaccatgatgtacag gattgtaaacaacctagtggacattccatcatcacaactgacaccaactgcagttagcatcagaggtcatagtcaaagat accttgtgccctatgccagaacctccatctatcagtactcattcttcccggactccatcaggaagtggaactctctacct atgacagtcgttgccagcagctccatctag |
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Protein
| Protein ID | pfu_aug2.0_1670.1_01759.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1670.1_01759.t1 MTRNIAVWRGSGHTQSFISSKKTESTGVAPLKSSDGLTYSDQATKANILNEQFSSVFNANEDLTIEDIKSPPYSPMPDIE ISTRGVQKLLAGLNIHKASGPDGVSTRLLKSFSSELAPVFSLLFQASLDQGTLPQDWKKADVTPIYKKGMKNCAANYRPV SLTSVVCKSMEHIICSNIMRHCDNHNVLTDAQHGFRKRRSCETQLVITLQDLAGNIDHKGQTDIILLDFSKTFDKVPHQR LLRKLQHYGIRGHTHKWILDFLQGREQRVVLGGCSSRIAPVTSGVPQGSVLGPLLFLLYINDLPNYISNHSTVRLFADDC ILYRDIRSPTDASLLQEDLDCLQRWEQDWLMEFHPHKCQVIHVTTKRAPIRVPYNIHGHQLEEAESAKYLGLIIHHKLDW NTHIGSTCKKANSTRAFLQRNISKCPTKIKALCYTTLVRPVMEYGSIIWDPHTAYNIRQLEMVQRRSARFVMGDYHTTSS VSPMMTTLHWQTLQERRAQAKMTMMYRIVNNLVDIPSSQLTPTAVSIRGHSQRYLVPYARTSIYQYSFFPDSIRKWNSLP MTVVASSSI |
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