Gene
| Gene Model ID | pfu_aug2.0_1670.1_01761 |
|---|---|
| Locus | scaffold1670.1 : 45422 ... 50435 : - |
| To GenomeBrowser | scaffold1670.1:45422..50435 |
| Genes list of scaffold | scaffold1670.1 |
| Synonym | pfu_aug1.0_1115.1_65808 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1670.1_01761.t1 | 1 | 1 | Fibrinogen_C | 36 | 223 | 0.0 | 198.4 | 0.0 | 0.0 | 198.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1670.1_01761.t1 | gi|260788746|ref|XP_002589410.1| | hypothetical protein BRAFLDRAFT_218135 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1670.1_01761.t1 | gi|390363232|ref|XP_785073.3| | 0.0 | |
| pfu_aug2.0_1670.1_01761.t1 | gi|688535266|ref|XP_009294381.1| | PREDICTED: uncharacterized protein LOC100126122 isoform X1 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1670.1_01761.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1670.1_01761.t1 atgtcacacttttgccctttgccgtgtggagcccgtaaaaaagttccccgcgaggggtttgacaactgtggaacgttaca ttccataaacccttctctacctgatggagtatacagaatatctctgaaacttgatgaaatggtatcagtattttgtaaca tgtcagatggcggatggacagtattccagcgaagaataagcggagaggtaaatttctacaggaattggtcggattatcgc attggttttggtgatactgcaggggaatattggcttggaaacgaatgcctccatcaacttacaagagatagaaattgtct tctaaaaattgacatggtgaactgggatgacttagcccgctttgctgaatacacagattttcgaattgacaacgagacag agggataccgattacatattgaaaattactccggtgacgcaaatgattctctctccttacataatggacataaatttagc acgttggatgtggacaatgatacttatcgttcagaaaattgtgcagtgagattcacgggtgcatggtggtatgccaactg tcataactcaaacttaaacggcgattatagtcagcgaaatagtaaaggcgtcaaatggaggcaatatcctggatcggatt atatgaaagagactgtaatgaaactaaaatgtacataa |
|
Protein
| Protein ID | pfu_aug2.0_1670.1_01761.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1670.1_01761.t1 MSHFCPLPCGARKKVPREGFDNCGTLHSINPSLPDGVYRISLKLDEMVSVFCNMSDGGWTVFQRRISGEVNFYRNWSDYR IGFGDTAGEYWLGNECLHQLTRDRNCLLKIDMVNWDDLARFAEYTDFRIDNETEGYRLHIENYSGDANDSLSLHNGHKFS TLDVDNDTYRSENCAVRFTGAWWYANCHNSNLNGDYSQRNSKGVKWRQYPGSDYMKETVMKLKCT |
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