Gene
| Gene Model ID | pfu_aug2.0_1670.1_01764 |
|---|---|
| Locus | scaffold1670.1 : 109966 ... 118620 : + |
| To GenomeBrowser | scaffold1670.1:109966..118620 |
| Genes list of scaffold | scaffold1670.1 |
| Synonym | pfu_aug1.0_1265.1_51244 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1670.1_01764.t1 | 2 | 1 | C1q | 66 | 169 | 4.1e-37 | 127.0 | 3.4e-20 | 8.4e-17 | 61.3 |
| pfu_aug2.0_1670.1_01764.t1 | 2 | 2 | C1q | 186 | 306 | 4.1e-37 | 127.0 | 9.2e-22 | 2.3e-18 | 66.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1670.1_01764.t1 | gi|524889590|ref|XP_005101350.1| | PREDICTED: uncharacterized protein LOC101851650 [Aplysia californica] | 2.0e-15 |
| pfu_aug2.0_1670.1_01764.t1 | gi|675874264|ref|XP_009022692.1| | hypothetical protein HELRODRAFT_188887 [Helobdella robusta] | 7.0e-12 |
| pfu_aug2.0_1670.1_01764.t1 | gi|742245413|ref|XP_010864285.1| | PREDICTED: cerebellin-3-like [Esox lucius] | 6.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_1670.1_01764.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1670.1_01764.t1 atgttacctttaaaaaggtatctggatgatattctaaccattgacaatcctgcttttgaattatataagaataaaattta tccacaagaattaacacataacaaggcaaacctttcaaatacagaaacatcgtttttggaccttaatatcaaaattgtaa acgataaattgataaaagcttcacaacaaattggattcactgcatgcctatcaaacagcgaccatcttggagatcatcaa actgtagaatatgactttgttgtgactaatttaggtggcggctacgacacacgacactcacattttacagctccggtaac tgggctatatcagtttgcagtaacggtaatgtctaagctaggtagggtgaatcatttacagatcgtcaagaacggatcag ggcttgtatcggtttttagcaccgggatatcagatgaaaccggtacaaatgtggtaaatgtgcacttacaaaacgatgat atggtctgggtacagggcttggacacaggcagccaactagaagataaattgataaaagcttcacaacaaattggattcac tgcatgcctatcaaacagcgaccatcttggggatcatcaaactgtagaatatgactttgttgtgactaatttaggcggcg gctacgacacacgacactcacattttacagctccagtaactgggctctatcagtttgcagtaacggtaatgtctaagcta agtagggtgaatcatttacagatcgtcaagaacggatcagggcttgtatcggtttttagcaccgggatatcagatgaaac cggtacaaatatggtaaatgtgcacttacaaaaagatgatatggtctgggtacagggcttggacaccggcagccaactag aaggtgggcattggaactgtttctcaggaactttaattcaagccgatgtataa |
|
Protein
| Protein ID | pfu_aug2.0_1670.1_01764.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1670.1_01764.t1 MLPLKRYLDDILTIDNPAFELYKNKIYPQELTHNKANLSNTETSFLDLNIKIVNDKLIKASQQIGFTACLSNSDHLGDHQ TVEYDFVVTNLGGGYDTRHSHFTAPVTGLYQFAVTVMSKLGRVNHLQIVKNGSGLVSVFSTGISDETGTNVVNVHLQNDD MVWVQGLDTGSQLEDKLIKASQQIGFTACLSNSDHLGDHQTVEYDFVVTNLGGGYDTRHSHFTAPVTGLYQFAVTVMSKL SRVNHLQIVKNGSGLVSVFSTGISDETGTNMVNVHLQKDDMVWVQGLDTGSQLEGGHWNCFSGTLIQADV |
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