Gene
| Gene Model ID | pfu_aug2.0_1674.1_15190 |
|---|---|
| Locus | scaffold1674.1 : 100438 ... 126521 : - |
| To GenomeBrowser | scaffold1674.1:100438..126521 |
| Genes list of scaffold | scaffold1674.1 |
| Synonym | pfu_aug1.0_614.1_22227 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1674.1_15190.t1 | 1 | 1 | FYVE_2 | 46 | 158 | 2.2e-36 | 124.3 | 1.5e-39 | 3.8e-36 | 123.5 |
| pfu_aug2.0_1674.1_15190.t1 | 2 | 1 | C2 | 344 | 431 | 0.0 | 168.5 | 3.1e-26 | 7.8e-23 | 80.1 |
| pfu_aug2.0_1674.1_15190.t1 | 2 | 2 | C2 | 483 | 570 | 0.0 | 168.5 | 3.8e-28 | 9.5e-25 | 86.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1674.1_15190.t1 | gi|585666486|ref|XP_006817123.1| | PREDICTED: LOW QUALITY PROTEIN: rabphilin-3A-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1674.1_15190.t1 | gi|532000028|ref|XP_005344542.1| | PREDICTED: rabphilin-3A isoform X2 [Microtus ochrogaster] | 0.0 |
| pfu_aug2.0_1674.1_15190.t1 | gi|524914265|ref|XP_005111950.1| | PREDICTED: double C2-like domain-containing protein beta-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1674.1_15190.t1 | gi|658868857|ref|XP_008417321.1| | PREDICTED: rabphilin-3A isoform X2 [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_1674.1_15190.t1 | gi|658868853|ref|XP_008417319.1| | PREDICTED: rabphilin-3A isoform X1 [Poecilia reticulata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1674.1_15190.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1674.1_15190.t1 atgggagagatttcaacaaatagcaatatggatagatggacctgccccaatgaccgtcagttagccctgagggcaaaact gggtactgggtggtcagtccatacaaacaaattggcgtcatttcaaaggaccgatcatctgagtatggaggaacaggaac acataatgaatgtcatagctaaggctgattacttagaacaagtggaacaggaacgaataggtcgtttggtagagaaactt gagaacatgaagaagaacgccatgggtaatggtaacacacaatgtattctgtgtggtgacgagttcggactcctcggagc aaatcctacgagatgtgacgattgtaaaaatgctgtgtgcacaaagtgtggaatcgacacgtataactggcaaaaacaac aactatggttatgtaaaatctgcagtgaaaacagagaggtttggaagagatctggtgcttggtttttcaaaggcattccc aaatatgttttaccagaaaagaaatctgaccatgtaaagttcacagatcaaaaagctgatagcaatgagcaggaatcatc ggagagttctgacgatgagatatgcagtatgggtaaacatagaatcggcagacaaggagattcagagagtgacaacatta gcataacaagctccaccagtgggcagtactacagtggtcatgtgaccaaggagagtcgctcaagcataacgagtagtaat tatcacggagggcatataagtgctacagaaagcagcagaggagatgaattccacgacgattcagacagtgaaagtgccac agagtttagtcgacagggttccacacgatcgaacaaggaaattcctgaaccaatcaaaatcaaggaaactcctgatgctg acattgatgatgctttcaccaaatatggacgtaatacggtaaacggagaggacacttttgacaacagtccaccctcctcc cccgatagtgatacttcatccttaggagctttagaattttccatcctgtacgactctgtcaacaatgcgttacattgtac agtggtcagggcaaggtcactaaaggccatggactccaatggtttgtcagatccctatgttaagttacacctgctgcctg gagctagtaagtccaataaattgagaacaaaaaccattcataaaaccttgaatccagactggaatgaaacgttaacatac tatggtatcacagaggatgacatgctcagaaaaactcttaggttagctgttttagatgaagatgccttcggatatgattt tatcggagaaaccagggtgccactcaaacggctgaaagctcatcaaaccaaacatttcaacgtgttcttagaaaagcaac tcccaactgaaaaggatgatgacctattatccaacgacagagggaagcttctgttaggacttagatactctacctcaaaa caagccctactggtcaatataatacgctgtgccaacctggctgcctgcgactctaacggctactccgatccctacgttaa actatatctgaagccagatagagacaaaaaatctaaattcaaaacagcagtcaagaagaaaactctgaatccagaataca acgaggaattcatttatgaaatcaagcataatgaactggccaagaaaaccctagagattacagtatgggacagagatata ggaaagtctaatgattttgtaggtggtgtacaacttggtatcaatgctaaaggagagagactgaagcactggtttgacac tttaaaaaatcccgatcataaattcgagcgatggcatatcctggcagctgaacttattccggaggttaaataa |
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Protein
| Protein ID | pfu_aug2.0_1674.1_15190.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1674.1_15190.t1 MGEISTNSNMDRWTCPNDRQLALRAKLGTGWSVHTNKLASFQRTDHLSMEEQEHIMNVIAKADYLEQVEQERIGRLVEKL ENMKKNAMGNGNTQCILCGDEFGLLGANPTRCDDCKNAVCTKCGIDTYNWQKQQLWLCKICSENREVWKRSGAWFFKGIP KYVLPEKKSDHVKFTDQKADSNEQESSESSDDEICSMGKHRIGRQGDSESDNISITSSTSGQYYSGHVTKESRSSITSSN YHGGHISATESSRGDEFHDDSDSESATEFSRQGSTRSNKEIPEPIKIKETPDADIDDAFTKYGRNTVNGEDTFDNSPPSS PDSDTSSLGALEFSILYDSVNNALHCTVVRARSLKAMDSNGLSDPYVKLHLLPGASKSNKLRTKTIHKTLNPDWNETLTY YGITEDDMLRKTLRLAVLDEDAFGYDFIGETRVPLKRLKAHQTKHFNVFLEKQLPTEKDDDLLSNDRGKLLLGLRYSTSK QALLVNIIRCANLAACDSNGYSDPYVKLYLKPDRDKKSKFKTAVKKKTLNPEYNEEFIYEIKHNELAKKTLEITVWDRDI GKSNDFVGGVQLGINAKGERLKHWFDTLKNPDHKFERWHILAAELIPEVK |
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