Gene
| Gene Model ID | pfu_aug2.0_1683.1_11801 |
|---|---|
| Locus | scaffold1683.1 : 1387 ... 24045 : - |
| To GenomeBrowser | scaffold1683.1:1387..24045 |
| Genes list of scaffold | scaffold1683.1 |
| Synonym | pfu_aug1.0_9448.1_02754 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| long-chain fatty acid transport protein 6 | GO:0003824 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1683.1_11801.t1 | 1 | 1 | AMP-binding | 57 | 486 | 0.0 | 237.5 | 0.0 | 0.0 | 236.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1683.1_11801.t1 | gi|676463668|ref|XP_009056670.1| | hypothetical protein LOTGIDRAFT_232997 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1683.1_11801.t1 | gi|676463665|ref|XP_009056669.1| | hypothetical protein LOTGIDRAFT_216606 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1683.1_11801.t1 | gi|663239478|ref|XP_008491479.1| | PREDICTED: long-chain fatty acid transport protein 6, partial [Calypte anna] | 0.0 |
| pfu_aug2.0_1683.1_11801.t1 | gi|686585948|ref|XP_009285114.1| | PREDICTED: long-chain fatty acid transport protein 6 [Aptenodytes forsteri] | 0.0 |
| pfu_aug2.0_1683.1_11801.t1 | gi|729740098|ref|XP_010566271.1| | PREDICTED: long-chain fatty acid transport protein 6 [Haliaeetus leucocephalus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1683.1_11801.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1683.1_11801.t1 atgctgccagttttagccactgcactcggtgcagcaggagttacctaccttggtgccaagtactttacaccatgggtgtt cgaagatttcaaaatgataaagaaattcaaattttccctcgaccagtactacaaatgtgccaaggagaataggttcctta ttgacatctttgaatctatggtattgaagcatccagacaaagtgattttacgatacgaagatgaatcgtacactttccgt caaattaacgacagagctaaccagtgcgcccatgctttcttgtctcagggagttaagccgggggatgtgttggcgataat gatgcaaaatgaaccgcagttcgtttggacataccttggtttcttgaaaattggtgtacaacttggatttatcaacttta accagcgccataagaccctagtacacagtataaagtcatgtgaagctcagtacctcatagttggagcagatccagaactt gaaaatgcagtgatggagatccaagatgagataggaaatgtgaagatctacacgtatacctctacgcaaaccattccaaa aagtacacccctggttcctatactggagaaatcggaattgtcgcctgtggaaatatcttacagatctggaattaagctga ctgatgccagtgtattcattttcacatctggaaccactgggttacccaaagctgccatagtgacccatgataaagccatc aagggctgctttgccatgtggtcatgtaatttgactagcgaggacgtcttgtatgagccactgccaatgtaccattctgc cgctgctttaattggcgttggaaatatgatcactttaggagcaactatggttttgaagaaaaaattctctgcttcacagt ttctagatgactgtagaaagtatgatgtgactgtgatacactatgtgggagagctttgtcgatatttggtgtcaagacct ccaagggacaatgatcgggaccacaaaatcaaacttgcctatggaaacggattgaggaaagacgtgtggaaggaactgaa tacaagattcaacattccaaacgttacagaattttacggtgcaacagagatgccagttggattcatcaatttgaccaata aatttggagcttgtggaagattgtcgccattactgaaaatgttggtaccagttgatcttgtaaagtatgatatggaggaa caggatttggtgcggaatgagaaagggtttgctgtgagggctaaagtaggtgaacctggacttctcatcataaagttaac aaatgtaaaaggcataacatttgaaggttacaaaggccgcactgaggaaaatcaaaagaaaattttccatgatgtgttta agaagggagatcagttcatcaatacaggagacttgtttactgtagacaaagattacgacatgtttttctctgatcgcatt ggagacactttcagatggaaaggagaaaatgtatctaccacagaagtgtcgaacatcctggtagagctagattttatcat ggatgcttgtgtatttggagtccttattccaggttgtgagggaagagcagggatggttgccttaagtctgaaatcacaag gggaaacaactcttacaacacatcagttggcaacgattatcgaccactgtaaaaataacctgggagtctacgcatggcca cgcttcctccgaattcagaaggagcttgaaatcacttccacttataaacaacgaaaaatggctctcgtaacagagggatt tgaccctgacaaggtcaaatctactgtttattacttggactgcaaaacacaaacgtacaagcaaattgacaaagcaacat atgcagaaatttgcagtggaaaaatagcaatatactgtctcaaatgggaaatagctctgtattctgcaaatactcaatat gcccctcaaggtattaggggtaaaataaaaatatcatggaaaagttag |
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Protein
| Protein ID | pfu_aug2.0_1683.1_11801.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1683.1_11801.t1 MLPVLATALGAAGVTYLGAKYFTPWVFEDFKMIKKFKFSLDQYYKCAKENRFLIDIFESMVLKHPDKVILRYEDESYTFR QINDRANQCAHAFLSQGVKPGDVLAIMMQNEPQFVWTYLGFLKIGVQLGFINFNQRHKTLVHSIKSCEAQYLIVGADPEL ENAVMEIQDEIGNVKIYTYTSTQTIPKSTPLVPILEKSELSPVEISYRSGIKLTDASVFIFTSGTTGLPKAAIVTHDKAI KGCFAMWSCNLTSEDVLYEPLPMYHSAAALIGVGNMITLGATMVLKKKFSASQFLDDCRKYDVTVIHYVGELCRYLVSRP PRDNDRDHKIKLAYGNGLRKDVWKELNTRFNIPNVTEFYGATEMPVGFINLTNKFGACGRLSPLLKMLVPVDLVKYDMEE QDLVRNEKGFAVRAKVGEPGLLIIKLTNVKGITFEGYKGRTEENQKKIFHDVFKKGDQFINTGDLFTVDKDYDMFFSDRI GDTFRWKGENVSTTEVSNILVELDFIMDACVFGVLIPGCEGRAGMVALSLKSQGETTLTTHQLATIIDHCKNNLGVYAWP RFLRIQKELEITSTYKQRKMALVTEGFDPDKVKSTVYYLDCKTQTYKQIDKATYAEICSGKIAIYCLKWEIALYSANTQY APQGIRGKIKISWKS |
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