Gene
| Gene Model ID | pfu_aug2.0_1689.1_31841 |
|---|---|
| Locus | scaffold1689.1 : 14146 ... 24087 : + |
| To GenomeBrowser | scaffold1689.1:14146..24087 |
| Genes list of scaffold | scaffold1689.1 |
| Synonym | pfu_aug1.0_25589.1_47741 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1689.1_31841.t1 | 1 | 1 | Phage_int_SAM_4 | 115 | 187 | 2.3e-07 | 31.0 | 1.7e-10 | 6.3e-07 | 29.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1689.1_31841.t1 | gi|637309419|ref|XP_008110528.1| | PREDICTED: uncharacterized protein LOC103279087 [Anolis carolinensis] | 4.0e-31 |
| pfu_aug2.0_1689.1_31841.t1 | gi|637253025|ref|XP_008117402.1| | PREDICTED: uncharacterized protein LOC103280379 isoform X1 [Anolis carolinensis] | 4.0e-29 |
| pfu_aug2.0_1689.1_31841.t1 | gi|512890109|ref|XP_004920939.1| | 1.0e-28 | |
| pfu_aug2.0_1689.1_31841.t1 | gi|156317768|ref|XP_001618041.1| | hypothetical protein NEMVEDRAFT_v1g227809 [Nematostella vectensis] | 2.0e-28 |
| pfu_aug2.0_1689.1_31841.t1 | gi|637277133|ref|XP_008104484.1| | PREDICTED: uncharacterized protein LOC103278197 [Anolis carolinensis] | 5.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_1689.1_31841.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1689.1_31841.t1 atgggcccgtcatggagtcccgtcgtcacagtcagtcagagtgcaagtattaaggatgcgctggtacaagactctaggtt ggtcaagtaccaagcccagtgtccgttggtgacattaggatcatatccacggtataaaaggcgtttgataattctgacgc atttttatgatgatttctatttattttcactcctctttggagtcgctggaggagcactgttcaagaacatacatcaaaat gaggaatattctacaattcaagcagctgtaccctcacatggacaaggattcaactccagtccaaacggaaccattgataa gctaacagcgacagcttcacatcttattcaacattcattatcagattcaacacaaaaggcatatactgctgtttatcaac gatacgtagctttcatacaaatgattaccagaggacaagaaatcgggccaaaggacatatcatgtgaaaaagtgacgctt ttcgtggcacattgctttgaactaggcttagctccatcgactgttcaaacctacgtttcagctttaggctttctagcaaa actacacggtcagcacgatatattacacaactttatgcttagaaagatgctgaatggctatcaaaaatctcagaaaattt gtgacaagcgcttgcccattacatcaaaaatactatgggagctggtcaaatcaatacccttcatttgcaattcttttttc agtcaagttcttattaaagctatgtattttatagcttttcacgcgtttctacgaattggggaaataacgcttaaaaacgg ttattctactcactgtattaaacgggaaaacattgtttttctttacaataacgattccgataaaccatctggtctggaac tgacatttgattcgttcaaacattcaacaggaaaatctccgcttacactgctgatcaaatccacatcttcctcagattgc tgtccagttgaagccctgttcaaatattgcagcatacgagacaattcaccaggtctggatggatcacctgttacttacaa ttattttaacaaacatttgcgattatctctactgtgggcaaatcttgactgcaaactctataaaggtcacagctttcgga tcggcgcagcaacaactgcggctgcaatgggtgtatcggacgaaaacattcaactcatgggccgatggcattcaaacgca ttcaaaaaatatattacgataccatccataacgcttacaggttcagaagactgtgtaaaagaatgtgcggtgaacacgtg tggtactggtaacacatgtttagagtcaggggacaacatatgtatttgtcctgccggtataagatcagggggaccaactt gtaatgatccatgtaccgacgacagctgtggtggtaatggacaatgtgtcccactagaatcagcacctaatggattcatc tgtgtttgtaacgagggattcgtgttctttggtggaacttgtgtacaaggtatattaacattgaagataggcaagatgga cgaaagtcgtagattgaatgaggaacttatctcttaa |
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Protein
| Protein ID | pfu_aug2.0_1689.1_31841.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1689.1_31841.t1 MGPSWSPVVTVSQSASIKDALVQDSRLVKYQAQCPLVTLGSYPRYKRRLIILTHFYDDFYLFSLLFGVAGGALFKNIHQN EEYSTIQAAVPSHGQGFNSSPNGTIDKLTATASHLIQHSLSDSTQKAYTAVYQRYVAFIQMITRGQEIGPKDISCEKVTL FVAHCFELGLAPSTVQTYVSALGFLAKLHGQHDILHNFMLRKMLNGYQKSQKICDKRLPITSKILWELVKSIPFICNSFF SQVLIKAMYFIAFHAFLRIGEITLKNGYSTHCIKRENIVFLYNNDSDKPSGLELTFDSFKHSTGKSPLTLLIKSTSSSDC CPVEALFKYCSIRDNSPGLDGSPVTYNYFNKHLRLSLLWANLDCKLYKGHSFRIGAATTAAAMGVSDENIQLMGRWHSNA FKKYITIPSITLTGSEDCVKECAVNTCGTGNTCLESGDNICICPAGIRSGGPTCNDPCTDDSCGGNGQCVPLESAPNGFI CVCNEGFVFFGGTCVQGILTLKIGKMDESRRLNEELIS |
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