Gene
| Gene Model ID | pfu_aug2.0_1689.1_31843 |
|---|---|
| Locus | scaffold1689.1 : 36128 ... 59505 : - |
| To GenomeBrowser | scaffold1689.1:36128..59505 |
| Genes list of scaffold | scaffold1689.1 |
| Synonym | pfu_aug1.0_2201.1_22906 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1689.1_31843.t1 | 2 | 1 | Copine | 67 | 101 | 0.0 | 216.9 | 2.9e-11 | 1.4e-07 | 31.3 |
| pfu_aug2.0_1689.1_31843.t1 | 2 | 1 | vWA-TerF-like | 71 | 91 | 2.0e-09 | 37.5 | 0.48 | 2400.0 | -1.9 |
| pfu_aug2.0_1689.1_31843.t1 | 2 | 2 | Copine | 200 | 350 | 0.0 | 216.9 | 0.0 | 0.0 | 184.0 |
| pfu_aug2.0_1689.1_31843.t1 | 2 | 2 | vWA-TerF-like | 207 | 406 | 2.0e-09 | 37.5 | 1.4e-12 | 6.8e-09 | 35.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1689.1_31843.t1 | gi|524886412|ref|XP_005099802.1| | PREDICTED: copine-3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1689.1_31843.t1 | gi|524895425|ref|XP_005104195.1| | PREDICTED: copine-3-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1689.1_31843.t1 | gi|676470781|ref|XP_009058960.1| | hypothetical protein LOTGIDRAFT_178865 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1689.1_31843.t1 | gi|676470785|ref|XP_009058961.1| | hypothetical protein LOTGIDRAFT_123531 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1689.1_31843.t1 | gi|524893007|ref|XP_005103025.1| | PREDICTED: copine-3-like isoform X2 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1689.1_31843.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1689.1_31843.t1 atgaagacgtcatatccttgtatcaatccaaagaaagttggaaagaagaaatatcagaattctggtacggtacaggtgtt ggaattcaagctgttcaaacggccgtcatttttggaatttatatatggtggtttacagatcaactttaccgttggtatag atttcacagcatcaaatggaaatccatcaagtagtaattcattgcattatataaacccatatcagcctaaccaataccag caagccatcagggctgtgggaaatgtctgtcaggattatgatacttatcataaaataaatgcacgcacacgtaccctaca gtgtttcagcacatccaacgtgttaaaaaatccttttgcaaaaaaattaaatgtgcccagcttgattcttaagatacgga gtgacacgtcatatccttgtataaatccaaagaaagttggaaagaagaaatatcagaattctggtacggtacaggtgtta gaattcaagctgttcaaacggccgtcatttttggaatttatatatggtggtttacagatcaactttaccgttggtataga tttcacagcttccaatggaaatccatcaagtagtaattcattgcattatataaacccatatcaacctaaccaataccagc aagccatcagggctgtgggaaatgtctgtcaggattatgataccgacaaactttttcctgtacttggttttggagccaga gtgcctccagccaatgaagtctcctttgaatttccagtcaattttaatcctcagaacccgtactgtgcaggtatagatgg tgtactacaggcatatcagaactgtatccagaacgtaactttatatggacccaccaatgtggcccccatcatctaccatg tggccaggtttgctgaggccgcacagaaagaggaaggcacgaagggaccatgtgcatactttatcctgctcttgctgact gatggggctatatcagacatggataatacagctaaggccgtggtgtatgcctcgggattacccatgtcacttatcatcgt cggggtcggagaggctgattttgccgctatgaacttcttggacggagacgaggggagacttaaggacagagacggccatc ccgttctcagagatattgtacagtttgtgccattcagagattttaaaaatgcttcccctgaggagttagcagcctgtgtt cttgctgaggtaccccagcaggtggtccagtattacggaatgaggaaactcctacccaaaccaagacctacacagtga |
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Protein
| Protein ID | pfu_aug2.0_1689.1_31843.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1689.1_31843.t1 MKTSYPCINPKKVGKKKYQNSGTVQVLEFKLFKRPSFLEFIYGGLQINFTVGIDFTASNGNPSSSNSLHYINPYQPNQYQ QAIRAVGNVCQDYDTYHKINARTRTLQCFSTSNVLKNPFAKKLNVPSLILKIRSDTSYPCINPKKVGKKKYQNSGTVQVL EFKLFKRPSFLEFIYGGLQINFTVGIDFTASNGNPSSSNSLHYINPYQPNQYQQAIRAVGNVCQDYDTDKLFPVLGFGAR VPPANEVSFEFPVNFNPQNPYCAGIDGVLQAYQNCIQNVTLYGPTNVAPIIYHVARFAEAAQKEEGTKGPCAYFILLLLT DGAISDMDNTAKAVVYASGLPMSLIIVGVGEADFAAMNFLDGDEGRLKDRDGHPVLRDIVQFVPFRDFKNASPEELAACV LAEVPQQVVQYYGMRKLLPKPRPTQ |
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