Gene
| Gene Model ID | pfu_aug2.0_1689.1_31844 |
|---|---|
| Locus | scaffold1689.1 : 59552 ... 73695 : - |
| To GenomeBrowser | scaffold1689.1:59552..73695 |
| Genes list of scaffold | scaffold1689.1 |
| Synonym | pfu_aug1.0_3705.1_08694 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1689.1_31844.t1 | 2 | 1 | C2 | 12 | 65 | 2.0e-22 | 78.8 | 1.6e-08 | 0.00023 | 20.9 |
| pfu_aug2.0_1689.1_31844.t1 | 2 | 2 | C2 | 114 | 197 | 2.0e-22 | 78.8 | 9.9e-20 | 1.5e-15 | 56.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1689.1_31844.t1 | gi|698386427|ref|XP_009819342.1| | PREDICTED: copine-3-like, partial [Gavia stellata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1689.1_31844.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1689.1_31844.t1 atgcaaggacgaaaaaacaagagctggacagagattggacgtacagagaacatacagaactgtcatgaccctaagtttgc caaatgttttactgtggattattactttgaggaggtacagcgtgtgaaagtggagatatacgacattgataatgctacac ccaaactgacggatgatgacttcctaggaatggtggaatgtaacttaggggagatagtgtccaggaatccatttacttca ccgttaaagaagaaaaatgggaaagattacgggatgtctgccattacaataaggtcagaggaagtgaggactggaggaga aatggcatacatgcattttgctgccaagaaacttgataataaggacttttttgggaaatctgatccttatgtagaaattc aaaggcatcttcccgacggggcctggcaagttgttcatcggacagaggtgataaaggacaccttgaatccaacatggaga ccatttgagttacctatccataccatgtgctcaggtgacaaagacaaaaatattaagtttgtagtttatgactgggatag tgatgggtcacatgaccttataggagactttgagacgaccatcaacaagctgtgttcacaagaacagaacagccgaatga aggatttgtga |
|
Protein
| Protein ID | pfu_aug2.0_1689.1_31844.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1689.1_31844.t1 MQGRKNKSWTEIGRTENIQNCHDPKFAKCFTVDYYFEEVQRVKVEIYDIDNATPKLTDDDFLGMVECNLGEIVSRNPFTS PLKKKNGKDYGMSAITIRSEEVRTGGEMAYMHFAAKKLDNKDFFGKSDPYVEIQRHLPDGAWQVVHRTEVIKDTLNPTWR PFELPIHTMCSGDKDKNIKFVVYDWDSDGSHDLIGDFETTINKLCSQEQNSRMKDL |
|