Gene
| Gene Model ID | pfu_aug2.0_1689.1_31847 |
|---|---|
| Locus | scaffold1689.1 : 121435 ... 133965 : - |
| To GenomeBrowser | scaffold1689.1:121435..133965 |
| Genes list of scaffold | scaffold1689.1 |
| Synonym | pfu_aug1.0_31166.1_26557 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1689.1_31847.t1 | 2 | 1 | PIP49_N | 13 | 125 | 2.9e-14 | 53.0 | 5.9e-18 | 2.9e-14 | 53.0 |
| pfu_aug2.0_1689.1_31847.t1 | 2 | 1 | PIP49_C | 50 | 60 | 0.0 | 164.6 | 2.1 | 11000.0 | -4.4 |
| pfu_aug2.0_1689.1_31847.t1 | 2 | 2 | PIP49_C | 189 | 381 | 0.0 | 164.6 | 0.0 | 0.0 | 164.6 |
| pfu_aug2.0_1689.1_31847.t1 | 2 | 2 | PIP49_N | 328 | 328 | 2.9e-14 | 53.0 | 1.2 | 5900.0 | -3.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1689.1_31847.t1 | gi|260796759|ref|XP_002593372.1| | hypothetical protein BRAFLDRAFT_70856 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1689.1_31847.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1689.1_31847.t1 atgcgaatcctgaccgtgaggaagagtcgtataataaagctgttcatcttggccgtggttttaggagtgttctcttactg gctaattaagttcatctgggtaatccaagaaagcaaatgttcagaggagaagtcacaccacctcatagaggaactgtgca atcattacaaaaatggcaaagttgctggtaatatttgcgatgacttgtgcaccaaccacactataaaatactacaaatgt actaattatagaagaggcaagaaagtcttatttactgaatgtaaggacaaatgtgtagaagggcggactgtaagagcagt gctgaagaccaaagatgaccaactcagctatgatgatctgtatcttggaaagtccaaagacggaggaatatctaaagatg ccctcgaaatgactagaactattttcagagacaggattcaaagccatttgaaaaagaccgatctcccaagcgatttattt agttatttatggtcaatggattattatgaatttgtcaacagcaaaaataatgacgtcacagcggaagtagctgctcttca aagcatatggtctcttgccaatcaagatgagtaccttttgattaggttgtaccaagatttaccatatattccaaaacttt atggttcgtgtggtggatattatcttctagagtttgctccgccgggaaatatcctgaatcaagattttatcagatatagt ccttcaccgtggaaagaaagagccaagatcgcgcttcaactgatagaattgtcccaatctgtggacaaagacttctatga acctttacacatttgtgacgtgaaaggggagaattttggtgtcgacacacagaatgccataaagttaatagatttggata ctattttcttcaataaagagatgctaggtcatctaagcagtggtatatgctccaagcacgaggattgtgacttctttgat tgtagggggtggtgcaatataactaggaacaggtgtacgagaatgagaaccaacaacaacttacagagtatatgtgagga catcttgatcgatagagcccataacttttactcagggctattgtactatcctccctccgccataaaaaccaaactgagcg ctctgttggagagatgtgcctatccaaagaacagtaaagggtctactgtacggcaaaagtcagagacggatgtgtactgg caactttataaccttctaaaataccaaatacagatctcataa |
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Protein
| Protein ID | pfu_aug2.0_1689.1_31847.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1689.1_31847.t1 MRILTVRKSRIIKLFILAVVLGVFSYWLIKFIWVIQESKCSEEKSHHLIEELCNHYKNGKVAGNICDDLCTNHTIKYYKC TNYRRGKKVLFTECKDKCVEGRTVRAVLKTKDDQLSYDDLYLGKSKDGGISKDALEMTRTIFRDRIQSHLKKTDLPSDLF SYLWSMDYYEFVNSKNNDVTAEVAALQSIWSLANQDEYLLIRLYQDLPYIPKLYGSCGGYYLLEFAPPGNILNQDFIRYS PSPWKERAKIALQLIELSQSVDKDFYEPLHICDVKGENFGVDTQNAIKLIDLDTIFFNKEMLGHLSSGICSKHEDCDFFD CRGWCNITRNRCTRMRTNNNLQSICEDILIDRAHNFYSGLLYYPPSAIKTKLSALLERCAYPKNSKGSTVRQKSETDVYW QLYNLLKYQIQIS |
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