Gene
| Gene Model ID | pfu_aug2.0_170.1_00353 |
|---|---|
| Locus | scaffold170.1 : 12606 ... 14475 : + |
| To GenomeBrowser | scaffold170.1:12606..14475 |
| Genes list of scaffold | scaffold170.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_170.1_00353.t1 | 1 | 1 | COX6B | 2 | 65 | 9.8e-17 | 60.7 | 2.3e-20 | 1.1e-16 | 60.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_170.1_00353.t1 | gi|632961107|ref|XP_007896574.1| | PREDICTED: cytochrome c oxidase assembly factor 6 homolog [Callorhinchus milii] | 2.0e-23 |
| pfu_aug2.0_170.1_00353.t1 | gi|697434252|ref|XP_009679012.1| | PREDICTED: cytochrome c oxidase assembly factor 6 homolog [Struthio camelus australis] | 5.0e-23 |
| pfu_aug2.0_170.1_00353.t1 | gi|557022898|ref|XP_006011683.1| | PREDICTED: cytochrome c oxidase assembly factor 6 homolog [Latimeria chalumnae] | 2.0e-22 |
| pfu_aug2.0_170.1_00353.t1 | gi|733877904|ref|XP_010705299.1| | PREDICTED: cytochrome c oxidase assembly factor 6 homolog [Meleagris gallopavo] | 2.0e-22 |
| pfu_aug2.0_170.1_00353.t1 | gi|696984325|ref|XP_009560421.1| | PREDICTED: cytochrome c oxidase assembly factor 6 homolog [Cuculus canorus] | 5.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_170.1_00353.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_170.1_00353.t1 atgtcagcaccatcgaaggaggcacgtgagaagtgttggaagcacaaggatgcatattggaattgtctggataaacatga tctggagagagaaaaatgtcaagatctccgtaaattatttgaagaaaactgtacaaagcaatgggtaaaatattttgata gaaggagagactatctgaaatacaaagataaaatggagagagaaggataccaacttaaagatgaaggatga |
|
Protein
| Protein ID | pfu_aug2.0_170.1_00353.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_170.1_00353.t1 MSAPSKEAREKCWKHKDAYWNCLDKHDLEREKCQDLRKLFEENCTKQWVKYFDRRRDYLKYKDKMEREGYQLKDEG |
|