Gene
| Gene Model ID | pfu_aug2.0_170.1_00354 |
|---|---|
| Locus | scaffold170.1 : 16317 ... 24325 : - |
| To GenomeBrowser | scaffold170.1:16317..24325 |
| Genes list of scaffold | scaffold170.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| breast cancer metastasis-suppressor 1-like protein | GO:0000122 GO:0004407 GO:0016575 GO:0042826 GO:0070822 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_170.1_00354.t1 | 2 | 1 | Sds3 | 10 | 35 | 2.1e-21 | 76.3 | 0.7 | 1000.0 | -1.0 |
| pfu_aug2.0_170.1_00354.t1 | 2 | 2 | Sds3 | 54 | 142 | 2.1e-21 | 76.3 | 1.4e-24 | 2.1e-21 | 76.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_170.1_00354.t1 | gi|688593674|ref|XP_009291140.1| | PREDICTED: breast cancer metastasis-suppressor 1-like protein-A isoform X3 [Danio rerio] | 6.00036e-42 |
| pfu_aug2.0_170.1_00354.t1 | gi|528505771|ref|XP_005158704.1| | PREDICTED: breast cancer metastasis-suppressor 1-like protein-A isoform X2 [Danio rerio] | 3.00004e-41 |
| pfu_aug2.0_170.1_00354.t1 | gi|528505769|ref|XP_005158703.1| | PREDICTED: breast cancer metastasis-suppressor 1-like protein-A isoform X1 [Danio rerio] | 4.00001e-41 |
| pfu_aug2.0_170.1_00354.t1 | gi|71834364|ref|NP_001025273.1| | breast cancer metastasis-suppressor 1-like protein-A [Danio rerio] | 5.99994e-41 |
| pfu_aug2.0_170.1_00354.t1 | gi|573888861|ref|XP_006632198.1| | PREDICTED: breast cancer metastasis-suppressor 1-like protein-A-like [Lepisosteus oculatus] | 3.0e-40 |
Transcript
| Transcript ID | pfu_aug2.0_170.1_00354.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_170.1_00354.t1 atgccaacagtagagaacgaaaagacagaaacagaagaagaagaaatggaacaggaaagcggcgatagtaacaaaagttc ggatgaggagtctgatactggttctatcgacgaagatggttcagatcttgatgaagaggaatgtgaacgaagaaaaacag aatgcatggaggacatgaatgatttggaaaagcaattctctgaccttaaagaaatgctttataaagaaaggatgggacaa gtaatggccaagttagatgaagtacgatcaggaaaagccatggagtacttgacaccactggctcaactacaggaaaacat gcaaatcaggacacaagttgcaggaattcttagggaatacagaatccactgtatacaaaacaaatgtgacagcgaaatac ttgcagcacaacaaaattttgagggccatacatcgtttatctattacgagacaatgacataa |
|
Protein
| Protein ID | pfu_aug2.0_170.1_00354.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_170.1_00354.t1 MPTVENEKTETEEEEMEQESGDSNKSSDEESDTGSIDEDGSDLDEEECERRKTECMEDMNDLEKQFSDLKEMLYKERMGQ VMAKLDEVRSGKAMEYLTPLAQLQENMQIRTQVAGILREYRIHCIQNKCDSEILAAQQNFEGHTSFIYYETMT |
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