Gene
| Gene Model ID | pfu_aug2.0_170.1_00355 |
|---|---|
| Locus | scaffold170.1 : 27606 ... 41218 : + |
| To GenomeBrowser | scaffold170.1:27606..41218 |
| Genes list of scaffold | scaffold170.1 |
| Synonym | pfu_aug1.0_2301.1_44331 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_170.1_00355.t1 | 2 | 1 | Fibrinogen_C | 1057 | 1271 | 0.0 | 373.0 | 0.0 | 0.0 | 233.1 |
| pfu_aug2.0_170.1_00355.t1 | 2 | 2 | Fibrinogen_C | 1278 | 1425 | 0.0 | 373.0 | 0.0 | 2.10055e-42 | 145.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_170.1_00355.t1 | gi|676431725|ref|XP_009046344.1| | hypothetical protein LOTGIDRAFT_185616 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_170.1_00355.t1 | gi|524886265|ref|XP_005099729.1| | PREDICTED: myb-like protein X-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_170.1_00355.t1 | gi|675865876|ref|XP_009018498.1| | hypothetical protein HELRODRAFT_157115 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_170.1_00355.t1 | gi|260797351|ref|XP_002593666.1| | hypothetical protein BRAFLDRAFT_252196 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_170.1_00355.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_170.1_00355.t1 atgtcccgacttcgatgcggaagcataaacactgaatcaaacgaagagctctgtgatatccgaaaatggtacctgaaaca tacagcagaggggacctttgacggcgacatttcaccggaacaactacggattaaaaatgggattgaagatattatgctaa ggggacaaagtgacccaaccttgagatttgtgaagtgtgaagttttacaaaaatttgacggagatctaaaaggccccgta aataaaattgacattcaaggaaacgtagaggacaaagctactgtaaatgatgttgttgattcgaatcctccacaaagtgc agacgaagaaattcctgatgagagtgaagtagatgagactgaaatggacgacactgagatgatggaggaggaagaaacag aggaagagaacaacgaagaaataatcggcaatgaagatgtatctgattctttgtcgtcaaacaatgaagagaccagggat gtcgatcgtgtcctagaggacatcattgacggtggtcagcaaaataacgatgatgttataataaagaatgatatcacttc acatagtgaacaagctttacaagaggatctaaagaatgatgataaagaagtaagggaagggaaacaagaggaactacagg ataatgtaaatatacttgaggacaaggaacctctccatgataatgttcgtagtgccagtggtaaattatccaaaactgca aaaccaaaaagaagaaagttcaaatttggaatatgcagagtgaagtattcacgtcagctcgatatatttgacattcaaaa tagtggagatgaaacgaatgtctcccaaacaaacatatccgattctcttgctcaaggcaggtcatatgatatttgttctg gacaaatggtgatgtctccgaattattgcttgatgcaacacatgctagacttttcaaacaatataacaaagctcgatact aacaataatgttgactcttcagatattttaaaagagagtgagaaagaggacaacagtgatgtggtatcgaaagacaagtc agattctatcaaagaagacgatgaggatgcaagagaaattaaactagacaaaataaaagacgaagtagatactgaaaata gaaattcaaagaagaaaatagtggaatatttagataataacttatcaactgacaatgagttaaaacccgacactacgaag gaaacagctggcgagaaaaattcctttattgatctggaaaacttggaaatgataatagcatcgaaaacacgtgaatacga aacgaagatgcaatcattggagcttgtcattatgaaattggaaaaccaagttttgatcgagaaattaaataaacagaatc atacttctacaatgtcaaggctagagacccaaattttgagactcgaaaatgagttactgaaaatgaaccaaagttatcat gatctgagatatgacaacgaggtcctaaagaaacgacaacgaaagtacctggaacttggtcactcctcgatgaattctac tcagcaagatggagagcaccatgctgtgataacggaacaacaagcaaagatatcacatctgtcccaactattgcataacc agtcgaccgccatcaatgagatgaaatctaggtcagactatttagaggaccagaacagaatgctctatcaaatggtgatg aaccaaacggctcttatgtcccagatcatgatgcgtgtgcaagagttgagtgaacaaaacatcagacagagagaagaggc acagaaactaaaagaacacctgaaatctgaagtaaaaacaatcatagaagaaagacaggatcaaaagttgaaagaacttt ccacaagaatgctacgagatattgacaatattgtatcagacaagaaactagaccggagctctgatagtagttcttcacca agtgaaaatggaaagttcactgaagtttccattgataggaaaatgtttacctacgagttccaaaggaaatggtgctttgg agacagtatttgcgtttataatacaataataaattcatggtgtataccgtactcttcagtcttttggactgaatgcgggg caatatattttaggaatagaagcgtggagaatgagtttggaccttttgcaaaggacgcagtgaccggcgagattcacaaa gaagaagcgacagagacacatccaagagatttaccagatgttatcacagtatccgacaaaaataatgatggaaacgatct taatcaatatttggatcatcctgattcgaaggatgaacaaggcaaaagcgacaaacagctgaaaatggaaacagacacaa cagcactagaacaatccttatccgccgacaagttagccgaggaaggcaatgatcaaaacaaagaaaagacaacagtacca cagcatatggaagtggttgaccattccaaagacaaggtgcaggaacaattgaaaacttcgtcaggaaatcttgatgatca tatgaaagaaacaacttcagatgaaaattcgtcaattcgaccgcttgtaccagaaaatgataacaactttgcgcctgaaa cagaaaaccaaagaccgagtcaagatggcgacatagctggacgtcagtcgtctgaggatgattttaaaacgaaacagcag gagaatgttcaaacaatggaccagaaatccgataacaaggaacatactggtattacgtcaggcgaccaaagtggaagcaa acaacagtctgatgataaaccaggaaaccaacaaatggaagcatttcaagatataaaccaacagaacgcccttgaggtag acagaaggcagaatgaagaaaatcaaacaggctcagaacagctcttggtcccaacaacacaacggcagctaactgaagga aaacaagaggtttctggtgataagaaagccgatgtttctgacgagaaacagaaagacggagattccaaagacaaaccaaa cgagagtgaaacaacaatgaaagcagacgataagaagcagtcaggagaaactggacaaaaaccaactaaagcagtgaaac aagaggcagaaggcaacaaaacggatcaacagaacaagaaagcaacaaaaactaaaagcactaagaaggggacacaagca gtgaagagaataccaccaaagtatgcgggtacatcaacccagactgatcccaaagattgctacgacctgtatctgcaagg caggaagcggaaccaagtgtacagaatcaaaccctacggtctcaataaaatgatagaggtattctgtgatatgaagaatg gtggatggaccatcatccagaagcgacaggacggaacaacaaatttctatagagagtggtcagaatacaagaaaggattc ggaggtgtgtatggagagcattggattggtaacgatcatttgcacagattgaccaatcaggatgagtatacgctgcgtgt tgacctcatggactggaagaggcagacaaggcatgctctgtacgattatttcctagtggaggacgagacagaaggatatc gtctgcacatagacggatatagcggagatgctggtgatgccatgaataaacataatggccacaagttctcgacaaaggac gtggataacgataaagtagtcaaggaactcggtggttcatgtgccaagaggttcagcggagccgggtggtattacaagtg ttatcaaaacaatctcaatggaaagtattacaggaatggcgatattccagaaaaactttatgatggaattacatggaagc cttggacaggtcctaattactcactgaaacaagctgaaatgaaaataagaccacgttctgcaatcagtgtgtatggagag cattggattggtaacgatcatttgcacagattgaccaatcaggatgagtatacgctgcgtgttgacctcatggactggaa gaggcagacaaggcatgctctgtacgattatttcctagtggaggacgagacagaaggatatcgtctgcacatagacggat atagcggagatgctggtgatgccatgaataaacataatggccacaagttctcgacaaaggacgtggataacgataaagta gtcaaggaactcggtggttcatgtgccaagaggttcagcggagccgggtggtattacaagtgttatcaaaacaatctcaa tggaaagtattacaggaatggcgatattccagaaaaactttatgatggaattacatggaagccttggacaggtcctaatt actcactgaaacaagctgaaatgaaaataagaccacgttctgcaatcagtaacacacagtcatga |
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Protein
| Protein ID | pfu_aug2.0_170.1_00355.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_170.1_00355.t1 MSRLRCGSINTESNEELCDIRKWYLKHTAEGTFDGDISPEQLRIKNGIEDIMLRGQSDPTLRFVKCEVLQKFDGDLKGPV NKIDIQGNVEDKATVNDVVDSNPPQSADEEIPDESEVDETEMDDTEMMEEEETEEENNEEIIGNEDVSDSLSSNNEETRD VDRVLEDIIDGGQQNNDDVIIKNDITSHSEQALQEDLKNDDKEVREGKQEELQDNVNILEDKEPLHDNVRSASGKLSKTA KPKRRKFKFGICRVKYSRQLDIFDIQNSGDETNVSQTNISDSLAQGRSYDICSGQMVMSPNYCLMQHMLDFSNNITKLDT NNNVDSSDILKESEKEDNSDVVSKDKSDSIKEDDEDAREIKLDKIKDEVDTENRNSKKKIVEYLDNNLSTDNELKPDTTK ETAGEKNSFIDLENLEMIIASKTREYETKMQSLELVIMKLENQVLIEKLNKQNHTSTMSRLETQILRLENELLKMNQSYH DLRYDNEVLKKRQRKYLELGHSSMNSTQQDGEHHAVITEQQAKISHLSQLLHNQSTAINEMKSRSDYLEDQNRMLYQMVM NQTALMSQIMMRVQELSEQNIRQREEAQKLKEHLKSEVKTIIEERQDQKLKELSTRMLRDIDNIVSDKKLDRSSDSSSSP SENGKFTEVSIDRKMFTYEFQRKWCFGDSICVYNTIINSWCIPYSSVFWTECGAIYFRNRSVENEFGPFAKDAVTGEIHK EEATETHPRDLPDVITVSDKNNDGNDLNQYLDHPDSKDEQGKSDKQLKMETDTTALEQSLSADKLAEEGNDQNKEKTTVP QHMEVVDHSKDKVQEQLKTSSGNLDDHMKETTSDENSSIRPLVPENDNNFAPETENQRPSQDGDIAGRQSSEDDFKTKQQ ENVQTMDQKSDNKEHTGITSGDQSGSKQQSDDKPGNQQMEAFQDINQQNALEVDRRQNEENQTGSEQLLVPTTQRQLTEG KQEVSGDKKADVSDEKQKDGDSKDKPNESETTMKADDKKQSGETGQKPTKAVKQEAEGNKTDQQNKKATKTKSTKKGTQA VKRIPPKYAGTSTQTDPKDCYDLYLQGRKRNQVYRIKPYGLNKMIEVFCDMKNGGWTIIQKRQDGTTNFYREWSEYKKGF GGVYGEHWIGNDHLHRLTNQDEYTLRVDLMDWKRQTRHALYDYFLVEDETEGYRLHIDGYSGDAGDAMNKHNGHKFSTKD VDNDKVVKELGGSCAKRFSGAGWYYKCYQNNLNGKYYRNGDIPEKLYDGITWKPWTGPNYSLKQAEMKIRPRSAISVYGE HWIGNDHLHRLTNQDEYTLRVDLMDWKRQTRHALYDYFLVEDETEGYRLHIDGYSGDAGDAMNKHNGHKFSTKDVDNDKV VKELGGSCAKRFSGAGWYYKCYQNNLNGKYYRNGDIPEKLYDGITWKPWTGPNYSLKQAEMKIRPRSAISNTQS |
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