Gene
| Gene Model ID | pfu_aug2.0_170.1_00357 |
|---|---|
| Locus | scaffold170.1 : 75253 ... 88095 : - |
| To GenomeBrowser | scaffold170.1:75253..88095 |
| Genes list of scaffold | scaffold170.1 |
| Synonym | pfu_aug1.0_190603.1_28576 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine palmitoyltransferase 2-like | GO:0003824 GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_170.1_00357.t1 | 1 | 1 | Aminotran_1_2 | 171 | 381 | 1.8e-35 | 122.6 | 4.8e-39 | 2.4e-35 | 122.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_170.1_00357.t1 | gi|524899604|ref|XP_005106231.1| | PREDICTED: serine palmitoyltransferase 2-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_170.1_00357.t1 | gi|524899602|ref|XP_005106230.1| | PREDICTED: serine palmitoyltransferase 2-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_170.1_00357.t1 | gi|676431713|ref|XP_009046340.1| | hypothetical protein LOTGIDRAFT_212374 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_170.1_00357.t1 | gi|676431716|ref|XP_009046341.1| | hypothetical protein LOTGIDRAFT_206050 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_170.1_00357.t1 | gi|675873772|ref|XP_009022446.1| | hypothetical protein HELRODRAFT_66644 [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_170.1_00357.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_170.1_00357.t1 atggtggcagaaacgaatcacagaaataattcattatggagagagtctgccacaggaggaggtctccgtcaggatgagaa aaatggaatttcgccacatgggaaagctgacgcccataaaaatggaacgaacggaatagcttgtacaaatgttcccagca aaaccaatggaaaattacacaacacatccgtcagtcagaacacttcctttgaggaggatttttacgagtcgtttgaggac acccctatgttggctgctatatccacgtacgtcgggtatctcatccttgtagctgtcggacatatcagagaattccttaa aggaataggtataggtgtggtgaaatgtatggctgaacccaaactacccggctttgtgcctctttatcagtcctgggaga gtttctatacttggtatgtctacagacggatcagggactgctggaacagaccagtcggtagcgtgccaggagcggagatg gatattgtagatagggagaccaaggaccatggatggaattttaggcagcaaaaccaaggttaccttgaccttcacaagga gcttgacacactagtggcggagtatcttggcgttgaggcagccatcaccatacctatgggattcgctactaattccatga atatgccatctttagtaggaaaaggttgtcttattttgagcgatgagctgaaccatgcatctttaattttgggttgtcgt ctctcaggggcatcaattaggacattcaaacataattgcatgaaagatttagagaagaaactacgacaagctattgtaga attacaacctcggacacataggccatggaaaaaaatactcatagtagtagagggagtttatagtatggagggatctatag taagactaccagaggttgtagccttgaagaagaagtacaaagcttacctatatctggacgaggcccacagtgtgggtgct atgggaccacatggtaagggtgcggtggactactttggtctgaaccctgctgatatagacatcatgatgggaacattcac taaaagctttggtgctgccggagggtatataggaggaaccaagactctaaaggtattggaagaagttggggatatattac gcatcaagtattccagtggtaaatcaccaaactacaacgaaaaatgtgtggaacttgtacagatataa |
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Protein
| Protein ID | pfu_aug2.0_170.1_00357.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_170.1_00357.t1 MVAETNHRNNSLWRESATGGGLRQDEKNGISPHGKADAHKNGTNGIACTNVPSKTNGKLHNTSVSQNTSFEEDFYESFED TPMLAAISTYVGYLILVAVGHIREFLKGIGIGVVKCMAEPKLPGFVPLYQSWESFYTWYVYRRIRDCWNRPVGSVPGAEM DIVDRETKDHGWNFRQQNQGYLDLHKELDTLVAEYLGVEAAITIPMGFATNSMNMPSLVGKGCLILSDELNHASLILGCR LSGASIRTFKHNCMKDLEKKLRQAIVELQPRTHRPWKKILIVVEGVYSMEGSIVRLPEVVALKKKYKAYLYLDEAHSVGA MGPHGKGAVDYFGLNPADIDIMMGTFTKSFGAAGGYIGGTKTLKVLEEVGDILRIKYSSGKSPNYNEKCVELVQI |
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