Gene
| Gene Model ID | pfu_aug2.0_170.1_00364 |
|---|---|
| Locus | scaffold170.1 : 228501 ... 235755 : + |
| To GenomeBrowser | scaffold170.1:228501..235755 |
| Genes list of scaffold | scaffold170.1 |
| Synonym | pfu_aug1.0_1614.1_22681 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| polypeptide n-acetylgalactosaminyltransferase partial | GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_170.1_00364.t1 | 1 | 1 | Glycos_transf_2 | 37 | 132 | 1.3e-12 | 47.6 | 6.2e-16 | 3.0e-12 | 46.5 |
| pfu_aug2.0_170.1_00364.t1 | 2 | 1 | Ricin_B_lectin | 286 | 314 | 5.1e-11 | 42.6 | 0.053 | 260.0 | 1.6 |
| pfu_aug2.0_170.1_00364.t1 | 2 | 2 | Ricin_B_lectin | 315 | 423 | 5.1e-11 | 42.6 | 2.4e-14 | 1.2e-10 | 41.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_170.1_00364.t1 | gi|676489142|ref|XP_009064841.1| | hypothetical protein LOTGIDRAFT_196690 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_170.1_00364.t1 | gi|585648816|ref|XP_002732995.2| | PREDICTED: polypeptide N-acetylgalactosaminyltransferase 2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_170.1_00364.t1 | gi|701348132|ref|XP_009994634.1| | PREDICTED: polypeptide N-acetylgalactosaminyltransferase 14, partial [Chaetura pelagica] | 0.0 |
| pfu_aug2.0_170.1_00364.t1 | gi|632960913|ref|XP_007896465.1| | PREDICTED: polypeptide N-acetylgalactosaminyltransferase 14 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_170.1_00364.t1 | gi|700434691|ref|XP_009956306.1| | PREDICTED: polypeptide N-acetylgalactosaminyltransferase 14, partial [Leptosomus discolor] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_170.1_00364.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_170.1_00364.t1 atggttttttatgatattgatcacaacaaaaatggtttgtatgatagtcatcactatgataatggtttgtatgataatca tcacaatgataatgaggaggatggtaaactgttagcgtccattcctaaggttacactacataggagcaatcaaagagaag gagcgatacgatctcgtgtatggggagcagaaattgcctcaggggagataataacatttctggatagtcattgtgaagtc aacgatggatggctggaacctttactgtacagaatcaaagaggatcctcttgtagtagccgtgccattacttgacactat atcttcatcatcccttcagttgtcgccaacagatccaaagatgattggcggttttgactggaccttgaagttcaaatggg agtctatgccagaagaagattatgccgtaagaagagacagtgatcctatcaaaacacctgttatgtttggtgctgccttc agtgtccataaggatacttttgatagactggagctatcactacgtacttggatgtgtggaggatctatagagattcttcc ctgtagtcgtataggacatattttccgtaagcgtcatccttacacatttccagatgatagtaccagtatgtatatcagaa atgcaaggagggtggcagaggtctggatggatgaatataaacgttttttctacacgcagcgccccactgccagactaaaa ccttacggcagtgttgcagacaggaaaaagttacgacaacagttgaaatgtcagtctttcaaatggtacctccaaactgt ctacacccagctcaggtcaccagtgatagatgagttagcgtatggtatgatccagcaggacggactatgtatggacatcg atccaggtcacgtacctgtaattaccaaacttaacacctgttcagatcaaagaagctctcagcagaacggaccatgtatg gacatggatcctggtcatgtacctgtaattaccaaacttaacacctgttcagatcaaagaagctctcaggaatggttttg gaagaagagtgggaaaattataagtaatggcatgtgtctcagtgctgatgtaaaggagacgcatggctatgtactgatac agtactgtagtggagctgataaccagctatggtatcgtgagaagctactgattgtacaccaggcgtcacgtcagtgtata gacagtcataaagcaggaataggattggtcttatctgagtgtgatagtatgtacttcacacagcaatggacgctgtctat agacagggataaaaactga |
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Protein
| Protein ID | pfu_aug2.0_170.1_00364.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_170.1_00364.t1 MVFYDIDHNKNGLYDSHHYDNGLYDNHHNDNEEDGKLLASIPKVTLHRSNQREGAIRSRVWGAEIASGEIITFLDSHCEV NDGWLEPLLYRIKEDPLVVAVPLLDTISSSSLQLSPTDPKMIGGFDWTLKFKWESMPEEDYAVRRDSDPIKTPVMFGAAF SVHKDTFDRLELSLRTWMCGGSIEILPCSRIGHIFRKRHPYTFPDDSTSMYIRNARRVAEVWMDEYKRFFYTQRPTARLK PYGSVADRKKLRQQLKCQSFKWYLQTVYTQLRSPVIDELAYGMIQQDGLCMDIDPGHVPVITKLNTCSDQRSSQQNGPCM DMDPGHVPVITKLNTCSDQRSSQEWFWKKSGKIISNGMCLSADVKETHGYVLIQYCSGADNQLWYREKLLIVHQASRQCI DSHKAGIGLVLSECDSMYFTQQWTLSIDRDKN |
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