Gene
| Gene Model ID | pfu_aug2.0_170.1_00365 |
|---|---|
| Locus | scaffold170.1 : 236107 ... 271320 : - |
| To GenomeBrowser | scaffold170.1:236107..271320 |
| Genes list of scaffold | scaffold170.1 |
| Synonym | pfu_aug1.0_1614.1_22682 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| estrogen receptor | GO:0003700 GO:0003707 GO:0005496 GO:0005515 GO:0005634 GO:0006355 GO:0008270 GO:0022612 GO:0043401 GO:0043565 GO:0044702 GO:0048522 GO:0048608 GO:0061138 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_170.1_00365.t2 | 1 | 1 | zf-C4 | 213 | 281 | 1.1e-31 | 108.8 | 3.8e-35 | 1.9e-31 | 108.0 |
| pfu_aug2.0_170.1_00365.t2 | 1 | 1 | Hormone_recep | 353 | 534 | 5.7e-27 | 94.1 | 1.9e-30 | 9.5e-27 | 93.4 |
Transcript
| Transcript ID | pfu_aug2.0_170.1_00365.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_170.1_00365.t1 atgctcaaagtaaccatgcctcctccaaagaaacctaaaagtggtcctactaccatagaacaattcatgtcaaatgatga actcaagacagatgaggatgcagaaatggaaccaagggacttgtcgttgaaaccagacaaggagaataataatttagaaa gtcgacttttgaatgaaaacttacagcgagacatacaagaacgcctatcccttcagtttggtatgggaagttacagtgct actacagacaaggaatatctggactctaggaagaaccttgtcggtatattgaccgagcctcggtataaccacctcggttt tcctattgacagagattcgtccataggatcgttcccgttcttcgtaaatggattggaatctagaagggatgctgtcagta acctcatcccaaaagaagaggcggggcaccaccctatggtggggagtgtagtatcccagggatcatacattggtctgcct cacgtgatgcctaactatacgtcaacgtcagcaggagttgtgtatcgggataattcaaacagactgctccctattcttga cccgtccatttcctactctgaggggaggaggcttagggcggcatacgcagggacaggagcgaactccaccaacagacttt gtcaggtgtgtaatgacaacgcctcggggtttcactatggggtgtggtcgtgtgagggatgcaaggctttcttcaagagg agcatccagggtccggtagactacgtctgtccagccacaaacacgtgcacgatagacaaacaccgaagaaaaagctgtca ggcatgcaggttacgcaagtgctatgaagtgggcatgaataaaggaacacagcggaaagagcggaaaggaagtctatcat ccatgtccaccaagcagcagacgacagccaagaggagtcgcgcggactcgtcagacaatactgtcaattctactagtgga agtcccaatcctccgaagaatgctcgccgatctcagactacggttattttggcggcactaaacaaggcagaacttcccat gttggaggggttccacaatcataatcttccccccacaaaacttcacctccttaattccctcatcaaactagcagagaggg aattagtgcacctcatcaactgggcaaaaaatgttccaggttacacagatctgtcgctgggagaccaggtccatctgatc gagtgttgttggatggaattgctcctcttaaaccgtgcattccggtccagagaacaagacggcaatcgtctggtatttgc tccggatcttatactggacaggtcaatgtgggcagttgtggggatgacagagatctttgaacaggttgcagcagtatctg aacaaatggtgcatcttaacgtacataaagacgagttcttactgctgcaagcaacggtcctcgttaatgcagaggctcgc cgattggagagttatgtacagattcatcacatgcgacagtctttattggacgctattgtagatactgcacaaaaatatca tccagacaatctcagacatgtgccgtcccttcttctattattaactcatatacgacaagcaggagagcgtgccatcgctt actttcaaaaactcaaatatgagggtgctgtgaacttctgtgaccttttaaaggagatgctagatgcacaagattttatg gagagagtttccggaaatcaggtgcgacgtaatgaagactgtgacagtggccgtgtatcacagcctgggctcggcacggc aaaagttccttcacagtgtaagagtgcctgcacagctttagattacctgaacagtgtaagagttcctccacagtgttag |
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| Transcript ID | pfu_aug2.0_170.1_00365.t2 |
| Definition | - |
>pfu_aug2.0_170.1_00365.t2 atgctcaaagtaaccatgcctcctccaaagaaacctaaaagtggtcctactaccatagaacaattcatgtcaaatgatga actcaagacagatgaggatgcagaaatggaaccaagggacttgtcgttgaaaccagacaaggagaataataatttagaaa gtcgacttttgaatgaaaacttacagcgagacatacaagaacgcctatcccttcagtttggtatgggaagttacagtgct actacagacaaggaatatctggactctaggaagaaccttgtcggtatattgaccgagcctcggtataaccacctcggttt tcctattgacagagattcgtccataggatcgttcccgttcttcgtaaatggattggaatctagaagggatgctgtcagta acctcatcccaaaagaagaggcggggcaccaccctatggtggggagtgtagtatcccagggatcatacattggtctgcct cacgtgatgcctaactatacgtcaacgtcagcaggagttgtgtatcgggataattcaaacagactgctccctattcttga cccgtccatttcctactctgaggggaggaggcttagggcggcatacgcagggacaggagcgaactccaccaacagacttt gtcaggtgtgtaatgacaacgcctcggggtttcactatggggtgtggtcgtgtgagggatgcaaggctttcttcaagagg agcatccagggtccggtagactacgtctgtccagccacaaacacgtgcacgatagacaaacaccgaagaaaaagctgtca ggcatgcaggttacgcaagtgctatgaagtgggcatgaataaaggaacacagcggaaagagcggaaaggaagtctatcat ccatgtccaccaagcagcagacgacagccaagaggagtcgcgcggactcgtcagacaatactgtcaattctactagtgga agtcccaatcctccgaagaatgctcgccgatctcagactacggttattttggcggcactaaacaaggcagaacttcccat gttggaggggttccacaatcataatcttccccccacaaaacttcacctccttaattccctcatcaaactagcagagaggg aattagtgcacctcatcaactgggcaaaaaatgttccaggttacacagatctgtcgctgggagaccaggtccatctgatc gagtgttgttggatggaattgctcctcttaaaccgtgcattccggtccagagaacaagacggcaatcgtctggtatttgc tccggatcttatactggacaggtcaatgtgggcagttgtggggatgacagagatctttgaacaggttgcagcagtatctg aacaaatggtgcatcttaacgtacataaagacgagttcttactgctgcaagcaacggtcctcgttaatgcagaggctcgc cgattggagagttatgtacagattcatcacatgcgacagtctttattggacgctattgtagatactgcacaaaaatatca tccagacaatctcagacatgtgccgtcccttcttctattattaactcatatacgacaagcaggagagcgtgccatcgctt actttcaaaaactcaaatatgagggtgctgtgaacttctgtgaccttttaaaggagatgctagatgcacaagattttatg gagagagtttccggaaatcaggtgcgacgtaatgaagactgtgacagtggccgtgtatcacagcctgggctcggcacgta a |
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Protein
| Protein ID | pfu_aug2.0_170.1_00365.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_170.1_00365.t1 MLKVTMPPPKKPKSGPTTIEQFMSNDELKTDEDAEMEPRDLSLKPDKENNNLESRLLNENLQRDIQERLSLQFGMGSYSA TTDKEYLDSRKNLVGILTEPRYNHLGFPIDRDSSIGSFPFFVNGLESRRDAVSNLIPKEEAGHHPMVGSVVSQGSYIGLP HVMPNYTSTSAGVVYRDNSNRLLPILDPSISYSEGRRLRAAYAGTGANSTNRLCQVCNDNASGFHYGVWSCEGCKAFFKR SIQGPVDYVCPATNTCTIDKHRRKSCQACRLRKCYEVGMNKGTQRKERKGSLSSMSTKQQTTAKRSRADSSDNTVNSTSG SPNPPKNARRSQTTVILAALNKAELPMLEGFHNHNLPPTKLHLLNSLIKLAERELVHLINWAKNVPGYTDLSLGDQVHLI ECCWMELLLLNRAFRSREQDGNRLVFAPDLILDRSMWAVVGMTEIFEQVAAVSEQMVHLNVHKDEFLLLQATVLVNAEAR RLESYVQIHHMRQSLLDAIVDTAQKYHPDNLRHVPSLLLLLTHIRQAGERAIAYFQKLKYEGAVNFCDLLKEMLDAQDFM ERVSGNQVRRNEDCDSGRVSQPGLGTAKVPSQCKSACTALDYLNSVRVPPQC |
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| Protein ID | pfu_aug2.0_170.1_00365.t2 |
| Definition | - |
>pfu_aug2.0_170.1_00365.t2 MLKVTMPPPKKPKSGPTTIEQFMSNDELKTDEDAEMEPRDLSLKPDKENNNLESRLLNENLQRDIQERLSLQFGMGSYSA TTDKEYLDSRKNLVGILTEPRYNHLGFPIDRDSSIGSFPFFVNGLESRRDAVSNLIPKEEAGHHPMVGSVVSQGSYIGLP HVMPNYTSTSAGVVYRDNSNRLLPILDPSISYSEGRRLRAAYAGTGANSTNRLCQVCNDNASGFHYGVWSCEGCKAFFKR SIQGPVDYVCPATNTCTIDKHRRKSCQACRLRKCYEVGMNKGTQRKERKGSLSSMSTKQQTTAKRSRADSSDNTVNSTSG SPNPPKNARRSQTTVILAALNKAELPMLEGFHNHNLPPTKLHLLNSLIKLAERELVHLINWAKNVPGYTDLSLGDQVHLI ECCWMELLLLNRAFRSREQDGNRLVFAPDLILDRSMWAVVGMTEIFEQVAAVSEQMVHLNVHKDEFLLLQATVLVNAEAR RLESYVQIHHMRQSLLDAIVDTAQKYHPDNLRHVPSLLLLLTHIRQAGERAIAYFQKLKYEGAVNFCDLLKEMLDAQDFM ERVSGNQVRRNEDCDSGRVSQPGLGT |
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