Gene
| Gene Model ID | pfu_aug2.0_170.1_00369 |
|---|---|
| Locus | scaffold170.1 : 365431 ... 376892 : + |
| To GenomeBrowser | scaffold170.1:365431..376892 |
| Genes list of scaffold | scaffold170.1 |
| Synonym | pfu_aug1.0_16813.1_03763 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_170.1_00369.t1 | 3 | 1 | rve | 4 | 108 | 3.3e-26 | 91.7 | 3.5e-29 | 1.7e-25 | 89.4 |
| pfu_aug2.0_170.1_00369.t1 | 3 | 2 | rve | 225 | 242 | 3.3e-26 | 91.7 | 0.84 | 4100.0 | -2.2 |
| pfu_aug2.0_170.1_00369.t1 | 3 | 3 | rve | 430 | 470 | 3.3e-26 | 91.7 | 0.91 | 4500.0 | -2.3 |
| pfu_aug2.0_170.1_00369.t1 | 1 | 1 | Peptidase_C48 | 540 | 632 | 2.8e-08 | 33.6 | 2.7e-11 | 1.3e-07 | 31.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_170.1_00369.t1 | gi|542254234|ref|XP_005462888.1| | PREDICTED: gypsy retrotransposon integrase-like protein 1-like [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_170.1_00369.t1 | gi|449681501|ref|XP_004209841.1| | PREDICTED: uncharacterized protein LOC101240796 [Hydra vulgaris] | 0.0 |
| pfu_aug2.0_170.1_00369.t1 | gi|449690194|ref|XP_004212272.1| | 0.0 | |
| pfu_aug2.0_170.1_00369.t1 | gi|449666468|ref|XP_004206354.1| | 0.0 | |
| pfu_aug2.0_170.1_00369.t1 | gi|449691836|ref|XP_004212814.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_170.1_00369.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_170.1_00369.t1 atgataggggtggatttagttggtcctttggcagagacaacctcagggaacagatacattttcactgcaactgacttctt ctccaagtgggttgaagccttcccgatcccgtccaagacagcagaagatgtttctcgttgtatgatgaaactcttctgtc gttttggtgctgtgaaagctgttttgacagaccaaggaagagagtttgtaaacgaagttaatagacagctatgcaagtca tggaaggtcacacacaagatgacggctgcctaccatccacagaccaatggactggatgaaaggaccaaccaaaccataaa aacagctttgagaaaggtggtgaaccagaaccagagcgactgggatgaacacttggatggagtactgttttcactgagaa cgaagccgcagtcctccaccaagttttccccattctttctgttgtatgggagagaggcactttaccctagccaactgact gaaacatttgatttgactgagattccaacaatcgaggaccaagaggagacaatgacaagacgccaagaacagattgacat aacagagacggaggtgaagagcaacatagccgcagcccaggagaagcagaaggaggattatgccaagagaaagaggggaa gccgctacgtagagctgaaggaaggtgataaggtcctcctacacaacacaaagaaatataccaagaagagcaagggcaat ctggagacaaactacactggcccatatgtcatttgcagtgtacagaagaagactgcccagctgaaggacctgaaaggagc tgtactgaagacaagagtaaacatcgacagactgaaggccttcaaggatggacctgcagttagtgtagaggcaacatttg ctgattccactcctaccatggatatagataagcttgtctcagaggtcgagggaagacagacggtgttgcctgattcagct ggctccaagctgaaaagaagccaagctcgttcgcaaagaagcaaagcttcttccatattgaaaagtagccaagcttcatc cgctgaaggaaggaaggatcaggcagctgtggaagttaggccagcctcaacaacacctcaacagacatcatgggagaagg cagagaactcgctcctgatgttgaaagacagagcatcaagcaccacggaccaggagacgagattcctcttgcagtcagtt tgctctggagtgttcccagatgtgctggctaaagttcaacagctgtccttcccagcccttcacgacccacagcaatgcca ggacctaatagacacagaccctgtcaccagctttgtgtctgaggtatcttcaaggtttgagacaaagatggacaagtttg tcagggtgatttcccctcatatgcagcaagccagcagcagcgtagagagacagacctcagagacaatcctgctagctgcc ttgtacacagtgtccatgacgtctttgcaaccagtatcctctttggttcagacattgaagatactcccagacctagttgg tgaagtgacagatgacggacgattggacagatctacaaggatatcaatccatggagagaccttggacgcggatgacattg agacattggacaacgacaactggttgaatgacaaggtgatgaattcctacctgacgttgttgaaggtggagaaaaatatg ggtgctactcatatttttgtcctgccttcatacaccgcagtgcactgggaaagggggttgtttcatccatggctgttcaa aaaggtccagttttccaacttcgagaaaatattgatgccagtcaacgtcaatgggaaccattgggtcctttttgtagcag atatggtatacaagacagtaggagtactggattccctgggaggctcccatgaattcaagtacatcacatattggaggtaa |
|
Protein
| Protein ID | pfu_aug2.0_170.1_00369.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_170.1_00369.t1 MIGVDLVGPLAETTSGNRYIFTATDFFSKWVEAFPIPSKTAEDVSRCMMKLFCRFGAVKAVLTDQGREFVNEVNRQLCKS WKVTHKMTAAYHPQTNGLDERTNQTIKTALRKVVNQNQSDWDEHLDGVLFSLRTKPQSSTKFSPFFLLYGREALYPSQLT ETFDLTEIPTIEDQEETMTRRQEQIDITETEVKSNIAAAQEKQKEDYAKRKRGSRYVELKEGDKVLLHNTKKYTKKSKGN LETNYTGPYVICSVQKKTAQLKDLKGAVLKTRVNIDRLKAFKDGPAVSVEATFADSTPTMDIDKLVSEVEGRQTVLPDSA GSKLKRSQARSQRSKASSILKSSQASSAEGRKDQAAVEVRPASTTPQQTSWEKAENSLLMLKDRASSTTDQETRFLLQSV CSGVFPDVLAKVQQLSFPALHDPQQCQDLIDTDPVTSFVSEVSSRFETKMDKFVRVISPHMQQASSSVERQTSETILLAA LYTVSMTSLQPVSSLVQTLKILPDLVGEVTDDGRLDRSTRISIHGETLDADDIETLDNDNWLNDKVMNSYLTLLKVEKNM GATHIFVLPSYTAVHWERGLFHPWLFKKVQFSNFEKILMPVNVNGNHWVLFVADMVYKTVGVLDSLGGSHEFKYITYWR |
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