Gene
| Gene Model ID | pfu_aug2.0_170.1_00373 |
|---|---|
| Locus | scaffold170.1 : 420330 ... 424567 : - |
| To GenomeBrowser | scaffold170.1:420330..424567 |
| Genes list of scaffold | scaffold170.1 |
| Synonym | pfu_aug1.0_14760.1_10733 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_170.1_00373.t1 | 1 | 1 | Gal-3-0_sulfotr | 109 | 273 | 3.4e-20 | 72.0 | 6.0e-24 | 4.5e-20 | 71.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_170.1_00373.t1 | gi|260824315|ref|XP_002607113.1| | hypothetical protein BRAFLDRAFT_68093 [Branchiostoma floridae] | 3.0e-24 |
| pfu_aug2.0_170.1_00373.t1 | gi|260798704|ref|XP_002594340.1| | hypothetical protein BRAFLDRAFT_186705 [Branchiostoma floridae] | 3.0e-22 |
| pfu_aug2.0_170.1_00373.t1 | gi|260788899|ref|XP_002589486.1| | hypothetical protein BRAFLDRAFT_125194 [Branchiostoma floridae] | 3.0e-22 |
| pfu_aug2.0_170.1_00373.t1 | gi|524874705|ref|XP_005094087.1| | PREDICTED: galactose-3-O-sulfotransferase 2-like isoform X2 [Aplysia californica] | 5.0e-22 |
| pfu_aug2.0_170.1_00373.t1 | gi|260828446|ref|XP_002609174.1| | hypothetical protein BRAFLDRAFT_92535 [Branchiostoma floridae] | 5.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_170.1_00373.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_170.1_00373.t1 atgagtacaaagggtaaacagttagtgtacaattccgtcatagtgtctgaagtaattcactcctcctcctcctcctcctc ctcaccaccactaccaccaccaccaacaccctctccaccccttctcattctaatcaacgtcaaggcatatttcaattacc agcaaatggaaatacaacaaaatgtggtggtggtggtggtggtggtggtggtggtggtagatggtggtggtggtagtggt ggtggtggtgaggaggagataacatataacatgtcggtgcatgtctttacaaggttgatgtatacatttatgccaggaaa agatgtgaatggtgccttatcctggtatctgaacaacacagccaaatataggaccaaacacgaacaggagtttagatatt taaacaacatgatggcgttctctttcggatttccgactgtgaatatgcaaaaagtcagtgtagaaaaaatagaccagttc ttaagaaagcttgatgctgaatttgatctggttatagtattagagtattttgatgaatctctagtattaatgaaaaggtt aatgtcgtggtcgacgaaggacattatatacatacaacaattgaacatggccgttaaggataaggattcggtcagggatt cgctgaccgacggagatcgactacgtcataaacaattagagtacgtagattttgctatatacaaccattttatgataaga ctattgaaaaagattcacgatgaaggtatatcgtttcaaagagagcttgaagactaccgggcggcaagatctgtcgctag tcagttttgtgaacatcataagccaaacgaagaactacaatacattactaaaaacttgaaggaagaaatcaagatagatt cgaatgattgtgattttatgaaattaaatggcaaggatatctggaaattggttctacagaccaagagatacaccatcgtt cctgtagactga |
|
Protein
| Protein ID | pfu_aug2.0_170.1_00373.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_170.1_00373.t1 MSTKGKQLVYNSVIVSEVIHSSSSSSSSPPLPPPPTPSPPLLILINVKAYFNYQQMEIQQNVVVVVVVVVVVVDGGGGSG GGGEEEITYNMSVHVFTRLMYTFMPGKDVNGALSWYLNNTAKYRTKHEQEFRYLNNMMAFSFGFPTVNMQKVSVEKIDQF LRKLDAEFDLVIVLEYFDESLVLMKRLMSWSTKDIIYIQQLNMAVKDKDSVRDSLTDGDRLRHKQLEYVDFAIYNHFMIR LLKKIHDEGISFQRELEDYRAARSVASQFCEHHKPNEELQYITKNLKEEIKIDSNDCDFMKLNGKDIWKLVLQTKRYTIV PVD |
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