Gene
| Gene Model ID | pfu_aug2.0_1701.1_05192 |
|---|---|
| Locus | scaffold1701.1 : 103927 ... 105695 : - |
| To GenomeBrowser | scaffold1701.1:103927..105695 |
| Genes list of scaffold | scaffold1701.1 |
| Synonym | pfu_aug1.0_37764.1_62928 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1701.1_05192.t1 | 1 | 1 | Retrotrans_gag | 149 | 235 | 1.1e-06 | 28.5 | 9.8e-10 | 2.9e-06 | 27.2 |
| pfu_aug2.0_1701.1_05192.t1 | 2 | 1 | zf-CCHC | 356 | 371 | 2.5e-07 | 30.2 | 1.7e-07 | 0.00051 | 19.8 |
| pfu_aug2.0_1701.1_05192.t1 | 2 | 2 | zf-CCHC | 451 | 466 | 2.5e-07 | 30.2 | 4.2e-06 | 0.012 | 15.4 |
Transcript
| Transcript ID | pfu_aug2.0_1701.1_05192.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1701.1_05192.t1 atgactactaatgagttaagcatggagcatgctgttgatcaattaacttctcagatgtcggacttagggaatgattctca gtcttttcattcgccccctggttcctctaatgatggtgacccaagtcctgacccccatccccaggatccctctaattctg gtattgatcccaatctcatggacgttcgaagggcccacaggaccccgcccgacgaagatgaaactattaagtggatagct ggtcaggtcaaaggtctacaaacggctatttcggttccccttctccaggtggtaaaaactttcgaaggcgacccctctaa atttaaacaatgggcgaaagatatagaaaggtacgcgcaaatggcaagacttgaaaattctgatattccgcgcatcgtac tcatgacgtgcacgggctcagtggcggattttgtgaaacgctatatagatgaggtagagtcaaataatgaacttccagat tggcttcgtcttaagaaattaatgcaaaaacgttttgctgaaatcacggaccaacagcaagctatggctgtactccgtag aatcaaacaaaaacccgaggaaagtgtccaattgtactctgaacgtttgctccgcttagcggaagacgcctacccaaccc ctttcgacgatagggttgatcagttggttcaaaaacagttggttgatattttttgtgacgggttgtgttacgattattta agaatgaaagttttgagggaagatcctgacaaatatgaaaaagcagtcgaaattgcaatgagagaacaaagtttacgtaa acgtttttatttgagatcagatacagagtacgcttcgctactagctggcacaaacccaaatttggctgggaatcaaaatt cacacgcagagttcattcagagaaaccgcagtgtaggtcatagtgaaaattttactacgcctatcaataacaatcagatt tacggcacgcgcgccccacctgcaaatgctcaaagcgcgttaaacacacagggtctagatttacggtttatagagccaat ggatatagatttctcgcgaaatgctagatgttttaaatgtacaggacaaggacaccgcgctcgtgattgtcctacttcaa atcgcgtaaacaaaaactggatcagagcacttgatagttctgacgatgaatcagatgatgaaagagtccctactcagaaa gtaaagaaatctgtaaagaaaatagagagccccccacctcagtcccatattaaacacaaaccccaaattaacagagctcc tggacggaatcctacccctagacaaggtcaaaatcgccaacaaaccccagattgggtgaaaggtgcagaatgttggatat gtcacatgataggtcaccttaaaagaaattgtccaaacaaaagagttccggatagaaacagagtcaatctgtacacctac tctcagccccagtaccaatggcaaagtgcccctacccacagacaatggcgaccctcccaattctctaggcaaagtcggga aaactaa |
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Protein
| Protein ID | pfu_aug2.0_1701.1_05192.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1701.1_05192.t1 MTTNELSMEHAVDQLTSQMSDLGNDSQSFHSPPGSSNDGDPSPDPHPQDPSNSGIDPNLMDVRRAHRTPPDEDETIKWIA GQVKGLQTAISVPLLQVVKTFEGDPSKFKQWAKDIERYAQMARLENSDIPRIVLMTCTGSVADFVKRYIDEVESNNELPD WLRLKKLMQKRFAEITDQQQAMAVLRRIKQKPEESVQLYSERLLRLAEDAYPTPFDDRVDQLVQKQLVDIFCDGLCYDYL RMKVLREDPDKYEKAVEIAMREQSLRKRFYLRSDTEYASLLAGTNPNLAGNQNSHAEFIQRNRSVGHSENFTTPINNNQI YGTRAPPANAQSALNTQGLDLRFIEPMDIDFSRNARCFKCTGQGHRARDCPTSNRVNKNWIRALDSSDDESDDERVPTQK VKKSVKKIESPPPQSHIKHKPQINRAPGRNPTPRQGQNRQQTPDWVKGAECWICHMIGHLKRNCPNKRVPDRNRVNLYTY SQPQYQWQSAPTHRQWRPSQFSRQSREN |
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