Gene
| Gene Model ID | pfu_aug2.0_1707.1_25098 |
|---|---|
| Locus | scaffold1707.1 : 47236 ... 64812 : + |
| To GenomeBrowser | scaffold1707.1:47236..64812 |
| Genes list of scaffold | scaffold1707.1 |
| Synonym | pfu_aug1.0_5570.1_52574 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| f-box only protein 11 | GO:0000151 GO:0005730 GO:0005737 GO:0006890 GO:0007605 GO:0008270 GO:0016274 GO:0016567 GO:0035246 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1707.1_25098.t1 | 1 | 1 | F-box | 100 | 140 | 1.9e-09 | 36.9 | 1.8e-12 | 5.3e-09 | 35.4 |
| pfu_aug2.0_1707.1_25098.t1 | 1 | 1 | F-box-like | 102 | 143 | 3.5e-15 | 55.4 | 2.1e-18 | 6.4e-15 | 54.6 |
| pfu_aug2.0_1707.1_25098.t1 | 4 | 1 | Beta_helix | 243 | 269 | 0.0 | 170.4 | 0.53 | 1600.0 | -1.3 |
| pfu_aug2.0_1707.1_25098.t1 | 4 | 2 | Beta_helix | 295 | 422 | 0.0 | 170.4 | 1.7e-17 | 5.2e-14 | 52.2 |
| pfu_aug2.0_1707.1_25098.t1 | 4 | 1 | NosD | 295 | 414 | 3.60001e-40 | 137.5 | 1.8e-12 | 5.4e-09 | 35.5 |
| pfu_aug2.0_1707.1_25098.t1 | 4 | 2 | NosD | 406 | 524 | 3.60001e-40 | 137.5 | 1.3e-13 | 3.9e-10 | 39.2 |
| pfu_aug2.0_1707.1_25098.t1 | 4 | 3 | Beta_helix | 419 | 570 | 0.0 | 170.4 | 2.2e-26 | 6.6e-23 | 81.2 |
| pfu_aug2.0_1707.1_25098.t1 | 4 | 3 | NosD | 445 | 595 | 3.60001e-40 | 137.5 | 3.8e-18 | 1.1e-14 | 54.1 |
| pfu_aug2.0_1707.1_25098.t1 | 4 | 4 | NosD | 530 | 680 | 3.60001e-40 | 137.5 | 3.7e-17 | 1.1e-13 | 50.9 |
| pfu_aug2.0_1707.1_25098.t1 | 4 | 4 | Beta_helix | 553 | 676 | 0.0 | 170.4 | 3.9e-20 | 1.2e-16 | 60.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1707.1_25098.t1 | gi|524873663|ref|XP_005093575.1| | PREDICTED: F-box only protein 11-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1707.1_25098.t1 | gi|642930110|ref|XP_008196256.1| | PREDICTED: F-box only protein 11 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_1707.1_25098.t1 | gi|242013961|ref|XP_002427667.1| | F-box only protein, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_1707.1_25098.t1 | gi|170032817|ref|XP_001844276.1| | f-box only protein [Culex quinquefasciatus] | 0.0 |
| pfu_aug2.0_1707.1_25098.t1 | gi|676458727|ref|XP_009055070.1| | hypothetical protein LOTGIDRAFT_215712 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1707.1_25098.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1707.1_25098.t1 atgtcgactccaaccacaagaactacaagaaatagttctcgaaaggtacgatgtcgcaaaatttccaagcaggcctcaag tagactccaaaattacggtgatgatatggatagacattcttctgaagaaatgaatgaaagactgccaagaggtagatact atctacgcaaacgttcgtctgagtctgacggatgccagtctttgtcagaaccaggttcaagttctggaaagcatagacgg aagtcctcatctcgttcaaatgcttgctccaaagttggtgctcaatacctacaggatgaatttcccgatgaagttttgct gaagattttcagttacttgttggaatatgatttatgcagagttgcatgtgtatgcaggcgcttcaagattatagccaatg acattgaattatggaaaacaatgtatcaagatgtttttgagtatgattacccactgatgaatccagagccaatggtgttc cgctttgtgcagccagatgagcatgagtacaataatccatggaaagaaagcttcagacagctgagaagagggactcatgt acgacagggttatgatgattgtcagtataaaggcagagacattatgtgttttgacacaatagagaaggcgtacagttatg tggattcagagaactttgaacacccagtgatatttattcattcaggaatctaccataacgaatatttatttgtggataca aatgtcgctatgattggagccgccccagggaatgttgtagatcacgtgatcattgagagagatagcgagtctacaatcat gtttgtagaaggagcaaaacaagcatatctgggatacgtcactctcaagtttacaccagacctgacttcctcactacccc acaacaagcattatgccttggaggttacagaaaactgttctcccgtcattgaccattgtaagattaaaagtctctccgtt gttggtgctgctgtctctgtatctggttctaatgctgatcctgtcgttaaacactgtaaaatcaaagactgtgagaatgt cggcctctttgtcgctgattacgcacagggcacatacgaggacaatgaaatcagtggtaatgctctagctggtatctggg taaagaaccatgccaatcccattatgaggaggaataatattcaccatggaagggacgtgggtatttttatatttgaaaat ggattaggatattttgaggccaatgacattcacaataaccgtatagccgggtttgaagtgaagggagctaacccaactgt tgttcgttgtgagatccatcatggacagacaggtggagtgtacgtccatgacaatgggcgaggacagttcatagagaata aaatccactccaataattttgctggtgtttggattacatcaaatagtgatccaaccattaggaaaaatgaaatattcaat gggcatcaaggtggagtatacatatttggagaaggaaggggtcttatagaatacaataacatatatggtaatgccttagc gggaatccagatccgaactaacagcaatcctattgtatggcataatgaaatccatcatggacagcatggaggcatctatg tgcacgaaaaaggtcaaggtcttatagaggagaatgaagtttattcaaatacgttagctggagtctggatcacgacaggg agtacgccagtacttagaaagaacagaatacatacaggcaagcaggttggtgtatatttttatgacaatggccatggtgt gttagaggacaatgatatctacaaccatctttattctggagtccagatcaggacgggtagtaatcctctcattcgaagga ataagatttggggcgggcagaatggtggaatactgatctacaataatgggctcggaatgatagagaaaaacgaaatctac gacaatgctatggctggcgtctggataaaaaatgacagtaatccactgctgaaggccaataaaatacatgatggaaggga cggggggatctgtatattcaacggtgcaaaagagaaagtttttcacttggccatgaaaaatgcactgacacggtag |
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Protein
| Protein ID | pfu_aug2.0_1707.1_25098.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1707.1_25098.t1 MSTPTTRTTRNSSRKVRCRKISKQASSRLQNYGDDMDRHSSEEMNERLPRGRYYLRKRSSESDGCQSLSEPGSSSGKHRR KSSSRSNACSKVGAQYLQDEFPDEVLLKIFSYLLEYDLCRVACVCRRFKIIANDIELWKTMYQDVFEYDYPLMNPEPMVF RFVQPDEHEYNNPWKESFRQLRRGTHVRQGYDDCQYKGRDIMCFDTIEKAYSYVDSENFEHPVIFIHSGIYHNEYLFVDT NVAMIGAAPGNVVDHVIIERDSESTIMFVEGAKQAYLGYVTLKFTPDLTSSLPHNKHYALEVTENCSPVIDHCKIKSLSV VGAAVSVSGSNADPVVKHCKIKDCENVGLFVADYAQGTYEDNEISGNALAGIWVKNHANPIMRRNNIHHGRDVGIFIFEN GLGYFEANDIHNNRIAGFEVKGANPTVVRCEIHHGQTGGVYVHDNGRGQFIENKIHSNNFAGVWITSNSDPTIRKNEIFN GHQGGVYIFGEGRGLIEYNNIYGNALAGIQIRTNSNPIVWHNEIHHGQHGGIYVHEKGQGLIEENEVYSNTLAGVWITTG STPVLRKNRIHTGKQVGVYFYDNGHGVLEDNDIYNHLYSGVQIRTGSNPLIRRNKIWGGQNGGILIYNNGLGMIEKNEIY DNAMAGVWIKNDSNPLLKANKIHDGRDGGICIFNGAKEKVFHLAMKNALTR |
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