Gene
| Gene Model ID | pfu_aug2.0_1707.1_25099 |
|---|---|
| Locus | scaffold1707.1 : 69346 ... 90328 : + |
| To GenomeBrowser | scaffold1707.1:69346..90328 |
| Genes list of scaffold | scaffold1707.1 |
| Synonym | pfu_aug1.0_3129.1_51900 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1707.1_25099.t1 | 2 | 1 | FH2 | 881 | 925 | 2.5e-13 | 49.6 | 0.034 | 250.0 | 0.3 |
| pfu_aug2.0_1707.1_25099.t1 | 2 | 2 | FH2 | 1098 | 1195 | 2.5e-13 | 49.6 | 3.3e-17 | 2.5e-13 | 49.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1707.1_25099.t1 | gi|676451835|ref|XP_009052836.1| | hypothetical protein LOTGIDRAFT_159891 [Lottia gigantea] | 9.0e-19 |
| pfu_aug2.0_1707.1_25099.t1 | gi|524868067|ref|XP_005090840.1| | PREDICTED: formin-like [Aplysia californica] | 6.0e-10 |
| pfu_aug2.0_1707.1_25099.t1 | gi|685549635|ref|XP_009208106.1| | PREDICTED: LOW QUALITY PROTEIN: formin-1-like [Papio anubis] | 5.0e-08 |
| pfu_aug2.0_1707.1_25099.t1 | gi|397466521|ref|XP_003845959.1| | PREDICTED: LOW QUALITY PROTEIN: formin-1 [Pan paniscus] | 6.0e-08 |
| pfu_aug2.0_1707.1_25099.t1 | gi|594664766|ref|XP_007180513.1| | PREDICTED: formin-1 isoform X2 [Balaenoptera acutorostrata scammoni] | 8.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_1707.1_25099.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1707.1_25099.t1 atggcaaatgaacaaacagtcaatgatgtggcaagtacactgaatgcgttccatatatctgacaggccggctggacctgg acctaatccaggagctaatgtcaatccatttgacaagactggtatacactgtggaggtggtgtccatccagggtctacaa atactatggttcaacaacagccaggaaccatgggaagtcaggcaccaggtaaagagctgacattagaggagaggagacag agaaggcttcagcgtagacaagcaatggccagcggtgaaggtgacagtagtcagggtcctgtcagaaatgtaccctcaga aggagcaagtattgcaggagttgagggacagaaacagagacggagatttattacacgtgaaccagaaggggaaaatgatg gtagccatgtctcacccaactcagggcatcaacaaatgtctcagaacacgccaaggagaatggtagcaacggaaggtttg ttaccatcaaagcctgtgattcctgacagatcaattgcaggtccagctgttcaagaatctactcctaggagtggaagcgg actaagtcggtctcaaagcttacgatatcggcagactcagggatctctgaacgagagttacatatctgaccaatcacctg gaagtcaaaggtctgatacgtcactaagctctatggagggtacccctgtagtagtaaggcaaagacgtgcgcggagtgtc gaaaggatgcaacaaatgaatagagagggacctcctaactttacaaggctgtcaccgcaaactgacagacaaagcaatac tatgtctcatacccctataatacagggtcatactccgcctgatcagtcaaggaatcagtctaattataatagctgtgata ataaacagttgagtcttccagaacaagctgaagtaactatacaaaatactcaaagcaacgaggctagcgctggaaatgtg ctggccaaattgcagtcaacatataaactgctgaggtcaaggtcatttaaccgtgacaagaaaccagaggtgacgaaaag agatggaagagaaagtcaaaatacccctagggaagaaaatcagcagccaagagaatctagggaaaatacacctagagaag acagtaatcatccaagtcagcagtttgatcaagaaaaagaccctcaacttatatacaggtctgacaaagaacagcaaata ttacaaaaccatgacccacccagccatgacagaacagatagaagtagacaggtctttgaagcctggcctgcacatccgtc tcatcctgttacggaaaattcaccgacgcataatcttcatgttcagggacattctatgcatccaaacaatcaagaggatg gagtgagacctcagcatataccagtcagggcaagcaggtctctggattcaagtaatcaaggggcacgtgcaatgagacgt atgacaggagtcactgaccttgatcaagccatgaaagatagggatcagtccatattgaacaaaagattcggaactacgca acagcaaggcaatgacatgatggtacccaaaccaaatgccgacagtgccatggaaactgatttagatgcagacgataccc ctgccagcagatataggtctcctgtcaaatatcctgacaaaaacagcccaatttctccaacaggtcaacagttctttgga aattctgatctgcattctcctgtccaaccngtcaaaatacccctagggaagaaaatcagcagccaagagaatctagggaa aatacacctagagaagacagtaatcatccaaggacattctatgcatccaaacaatccagaggaaggagtgagacctcaac atataccagtcagggcaagcaggtctctggattcaagtaatcaaggggcacgtgcaatgagacgtatgacaggagctact gaccttgatcaagccatgaaagatagggatcagtccatattgaacaaaagattcggaactacgcaacagcaaggcaatga catgatggtacccaaaccaaatgccgacagtgccatggaaactgatttagatgcagacgatacccctgccagcagatata ggtctcctgtcaaatatcctgacaaaaacagcccaatttctccaacaggtcaacagttctttggaaattctgatctgcat tctcctgtccaaccaaagataaattctcctacctcaccgtctattgcggcatatgaaagagaagtgagacgacaagagaa tgccaagatgaaggaccatcatcggcctccaatcacactggaggatgccataagatggccgtttaaccatccaggaaaat tagacttctcaaacatacaagtgtttgaaggcaagatgctgctccagtggttacaatcatcaattgatgaaaagcattat ctccgttttgccttgacacgccatgatcttaacgtagttagttcacagttctgcacttgtttactagctgctggtgttat caaccaagttgaggctactaagtcaaatgaagtattcaaggtctatcgatctactttgacttcttactgcatatactgcg atgaanctagccagattggacaaaaatatacagaagcagagcatcaagcagtacttctacaagtcagaacacagtatgtt gaagagctggaaaagatcaagattgagaaccaggctgttttggacaaatgtcgtgaggagtaccagaaccggttacaaga atgtgcggagaggatctgccagctacagaatgacgtggagagattccgcaagttggctgggatcgaggaatacacgcagg aagcccttgcacaggcggaagctgctcgtatggagtcaggacagatggtgaacggcttcatgacaccccaagatcagagg cagatgtacctggctgtaacggccactccccagtcacagatgtcaacgccctctcactcccagtatcacacccctgctgt cactcctgaatgtatcacaggggcatacccagtcagtgtactcagggaggatgaggacatgagcatgccacgtcccccag aggaactcagacctacagatccctctgccccgcctgtccctccccctcccccactcccacctagagacgggggtcctttc attccccctcctcccccacctccagggatgggaggtccacctgtacctcctcctccccctggtccaccaggacttggtgg tcccccacctcctcccccaccccctggagcacctccagctccgggagcacctggagcaccgggcttgtcaaggagagcct ctataaagcccataatccagaccagatctcccatgaaacctctcttctggcagagaatccaaatgtcatcagtcaaagca cctcaacattcaaagttactatgggaggagctagaggaggtacagattgatgtggaggaggtggacagtctgttctccaa gcctgtcgatgtcacgaagacagctaccaaagccaaaccaaaaacacctgttaaacaggtggcaaagatcattgacgcaa agagatctcagcttgtgggaattttgctgtcaagtctgcgattagattttgcagaaatagaacatggtaaggcatacaaa agttcaatttcaaggtga |
|
Protein
| Protein ID | pfu_aug2.0_1707.1_25099.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1707.1_25099.t1 MANEQTVNDVASTLNAFHISDRPAGPGPNPGANVNPFDKTGIHCGGGVHPGSTNTMVQQQPGTMGSQAPGKELTLEERRQ RRLQRRQAMASGEGDSSQGPVRNVPSEGASIAGVEGQKQRRRFITREPEGENDGSHVSPNSGHQQMSQNTPRRMVATEGL LPSKPVIPDRSIAGPAVQESTPRSGSGLSRSQSLRYRQTQGSLNESYISDQSPGSQRSDTSLSSMEGTPVVVRQRRARSV ERMQQMNREGPPNFTRLSPQTDRQSNTMSHTPIIQGHTPPDQSRNQSNYNSCDNKQLSLPEQAEVTIQNTQSNEASAGNV LAKLQSTYKLLRSRSFNRDKKPEVTKRDGRESQNTPREENQQPRESRENTPREDSNHPSQQFDQEKDPQLIYRSDKEQQI LQNHDPPSHDRTDRSRQVFEAWPAHPSHPVTENSPTHNLHVQGHSMHPNNQEDGVRPQHIPVRASRSLDSSNQGARAMRR MTGVTDLDQAMKDRDQSILNKRFGTTQQQGNDMMVPKPNADSAMETDLDADDTPASRYRSPVKYPDKNSPISPTGQQFFG NSDLHSPVQXVKIPLGKKISSQENLGKIHLEKTVIIQGHSMHPNNPEEGVRPQHIPVRASRSLDSSNQGARAMRRMTGAT DLDQAMKDRDQSILNKRFGTTQQQGNDMMVPKPNADSAMETDLDADDTPASRYRSPVKYPDKNSPISPTGQQFFGNSDLH SPVQPKINSPTSPSIAAYEREVRRQENAKMKDHHRPPITLEDAIRWPFNHPGKLDFSNIQVFEGKMLLQWLQSSIDEKHY LRFALTRHDLNVVSSQFCTCLLAAGVINQVEATKSNEVFKVYRSTLTSYCIYCDEXSQIGQKYTEAEHQAVLLQVRTQYV EELEKIKIENQAVLDKCREEYQNRLQECAERICQLQNDVERFRKLAGIEEYTQEALAQAEAARMESGQMVNGFMTPQDQR QMYLAVTATPQSQMSTPSHSQYHTPAVTPECITGAYPVSVLREDEDMSMPRPPEELRPTDPSAPPVPPPPPLPPRDGGPF IPPPPPPPGMGGPPVPPPPPGPPGLGGPPPPPPPPGAPPAPGAPGAPGLSRRASIKPIIQTRSPMKPLFWQRIQMSSVKA PQHSKLLWEELEEVQIDVEEVDSLFSKPVDVTKTATKAKPKTPVKQVAKIIDAKRSQLVGILLSSLRLDFAEIEHGKAYK SSISR |
|