Gene
| Gene Model ID | pfu_aug2.0_1707.1_25100 |
|---|---|
| Locus | scaffold1707.1 : 93146 ... 112202 : + |
| To GenomeBrowser | scaffold1707.1:93146..112202 |
| Genes list of scaffold | scaffold1707.1 |
| Synonym | pfu_aug1.0_3129.1_51901 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1707.1_25100.t1 | 2 | 1 | FH2 | 2 | 195 | 1.20512e-43 | 149.4 | 0.0 | 2.39622e-43 | 148.4 |
| pfu_aug2.0_1707.1_25100.t1 | 2 | 2 | FH2 | 205 | 227 | 1.20512e-43 | 149.4 | 0.13 | 120.0 | 1.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1707.1_25100.t1 | gi|556987244|ref|XP_005999003.1| | PREDICTED: formin-2 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_1707.1_25100.t1 | gi|530646402|ref|XP_005309835.1| | PREDICTED: formin-1 isoform X4 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_1707.1_25100.t1 | gi|641780298|ref|XP_008172879.1| | PREDICTED: formin-1 isoform X3 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1707.1_25100.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1707.1_25100.t1 atgttgatgacaggagagactgtaagagacgtattgggtcttatcctcgctgtaggaaactacatgaatggaggacacag aagtcgaggtcaggctgacggatttggattagaaatcctccctaagctcaaagatgttaaaactaaggataatagaatga gcctgttaacctacgtagtgtgtgcctacgttaagaagttccagagagatacagccggtacagactcggctaaagttcct gtccctgagcctagtgacattggccaagctgctctcgttaactttgatgaaattgaaaaggaactcaagaagatcaagaa agattttgattctgcggaaaagcgcgcggagaaagtgatgaagaatgccagcccacagtacttacagcccttcaaggaca ttatgacagctttctttatcaaaggcaaagtagaattcaaagagcaagaagagaatttaaaggaaggaaagagtctattt tcagaagtggtgttatttttctgtgtcaaaccaaagacaggagaggatacagtaacaccagaatacttcttctctttatg gtcagtgttctgtaaggacttcaaagatatctggaagaaggaacagcagaaaatggtcaagcaaagaatcaaggaagcag agaagcaattgaagcagttacaacagaagaagaaacaggcaccgtccactcgaacacgcagagctggcggactgagatct gaatttattgaaatgttgttagtgtttgtcttagagcacccacaggggtataaatctacgtga |
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Protein
| Protein ID | pfu_aug2.0_1707.1_25100.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1707.1_25100.t1 MLMTGETVRDVLGLILAVGNYMNGGHRSRGQADGFGLEILPKLKDVKTKDNRMSLLTYVVCAYVKKFQRDTAGTDSAKVP VPEPSDIGQAALVNFDEIEKELKKIKKDFDSAEKRAEKVMKNASPQYLQPFKDIMTAFFIKGKVEFKEQEENLKEGKSLF SEVVLFFCVKPKTGEDTVTPEYFFSLWSVFCKDFKDIWKKEQQKMVKQRIKEAEKQLKQLQQKKKQAPSTRTRRAGGLRS EFIEMLLVFVLEHPQGYKST |
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