Gene
| Gene Model ID | pfu_aug2.0_1707.1_25101 |
|---|---|
| Locus | scaffold1707.1 : 114356 ... 117070 : + |
| To GenomeBrowser | scaffold1707.1:114356..117070 |
| Genes list of scaffold | scaffold1707.1 |
| Synonym | pfu_aug1.0_3129.1_51902 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gremlin-1-like isoform x1 | GO:0005488 GO:0044699 GO:0065007 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1707.1_25101.t1 | 1 | 1 | DAN | 83 | 187 | 1.4e-33 | 114.9 | 3.7e-37 | 1.8e-33 | 114.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1707.1_25101.t1 | gi|676451579|ref|XP_009052752.1| | hypothetical protein LOTGIDRAFT_88176, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1707.1_25101.t1 | gi|632942141|ref|XP_007886251.1| | PREDICTED: gremlin-1 [Callorhinchus milii] | 5.0e-38 |
| pfu_aug2.0_1707.1_25101.t1 | gi|260818591|ref|XP_002604466.1| | hypothetical protein BRAFLDRAFT_220377 [Branchiostoma floridae] | 3.0e-37 |
| pfu_aug2.0_1707.1_25101.t1 | gi|573902001|ref|XP_006638726.1| | PREDICTED: gremlin-2-like [Lepisosteus oculatus] | 5.0e-37 |
| pfu_aug2.0_1707.1_25101.t1 | gi|395531547|ref|XP_003767839.1| | PREDICTED: gremlin-2 [Sarcophilus harrisii] | 2.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_1707.1_25101.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1707.1_25101.t1 atgaagtggtcgagcttggacctcaaactcgccgttgttttcctcataatttggatgttttgcacccaagccgacgccag gcgaggtcggcggagaaaaaaactggaggagggatttgggatatttaaaagaatgaacagtaaccctgattccgcgcctg cagtcaaaattgacagtgaatttgaacatttacccgaagctttccgtcatgcacggcggaaacgaccgattaaaggaagc aaacgagcatttattgtgacaaagaaacgctatttgcgcaaagaatggtgcaaaacgcaaccttttaaacagattgtacg tgaaccaggatgtattagtaggactattttaaacaatttctgttacgggcagtgcaattccttctttattcctaaaatat ccaaaaatgagattggagacgcttcgtttttatcatgtggcttttgcaaacctagaaaatacgcaaacattcgagtgact cttatttgtcccggaaaaagttacagagtgaaaaggaagaaaattctccgaataaagaaatgccgatgcatggcgcaaaa agtgaacgtatccaggtga |
|
Protein
| Protein ID | pfu_aug2.0_1707.1_25101.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1707.1_25101.t1 MKWSSLDLKLAVVFLIIWMFCTQADARRGRRRKKLEEGFGIFKRMNSNPDSAPAVKIDSEFEHLPEAFRHARRKRPIKGS KRAFIVTKKRYLRKEWCKTQPFKQIVREPGCISRTILNNFCYGQCNSFFIPKISKNEIGDASFLSCGFCKPRKYANIRVT LICPGKSYRVKRKKILRIKKCRCMAQKVNVSR |
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