Gene
| Gene Model ID | pfu_aug2.0_1707.1_25102 |
|---|---|
| Locus | scaffold1707.1 : 123067 ... 137233 : - |
| To GenomeBrowser | scaffold1707.1:123067..137233 |
| Genes list of scaffold | scaffold1707.1 |
| Synonym | pfu_aug1.0_13898.1_10658 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| crossover junction endonuclease mus81 | GO:0006259 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1707.1_25102.t1 | 1 | 1 | ERCC4 | 511 | 635 | 1.4e-18 | 67.0 | 4.0e-22 | 2.9e-18 | 65.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1707.1_25102.t1 | gi|390340256|ref|XP_780532.3| | 0.0 | |
| pfu_aug2.0_1707.1_25102.t1 | gi|676451854|ref|XP_009052842.1| | hypothetical protein LOTGIDRAFT_115731 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1707.1_25102.t1 | gi|585647428|ref|XP_006814047.1| | PREDICTED: crossover junction endonuclease MUS81-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1707.1_25102.t1 | gi|260830264|ref|XP_002610081.1| | hypothetical protein BRAFLDRAFT_125665 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1707.1_25102.t1 | gi|507947865|ref|XP_004682673.1| | PREDICTED: crossover junction endonuclease MUS81 isoform X2 [Condylura cristata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1707.1_25102.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1707.1_25102.t1 gtgacaagatgtgtaaaatgctcgatgacagattacagaaacatatagcccagtatggttcagcaatgccagtagccaat gagagcagcgatgacagtgatgatgtcattccgagttgtttacctcgtgttccgcagccaagacctacttcacgtcccac aaatccatccaatcagagagttgcaatagacatcagtgatagcgattctgacacggccagtagtaatagacagccagact cacaaccaaagaagaagaggcagagatcgggttcttcagggagagggagggagtatataccggcttacaggtctggtcca tatgcaatccttattatactttacaggaatcaacagactcccgacagcagatcgtacatgacaaagtcagaacttatcag tgaggcccagccacttgctgatacatctttctccttggcagacccaggtagtagatacacagcatggtcctctatgggct ccctgattaagaaagggttggtcatcaaggagagtagtcctgctaaatacagccttactgatgctggatgtgaactggcc cacaaactcgaggtggtccatgcgggagggagccctaccttgtcagcagggagccccaggagaccaggcgtatgctctcc agccactgtcaccagacctaggatatcacctgctagtcgtgccaactctacaagtgttactggttctgctcctggatcca gtacctcaagtgatttccagtttacctatgtgacagatgatgacagagaagttacagacaagggaaaggcagcagttctt attgacgatgatgacagagaagttacagacaagggaaatgcagcagttcttattgatgatgatattggagtggggtttct catcaagtgtaattacatcaagttacttcacacagggaagaaatataaactggacacagcaagacctatgggtactgatg tgtatgtgtacttacaagatattgatgcccctgacacatgttctacctcatctttacctcccttgccatctctaacaaca gatctggactctgaaaactcagacaaaaatacatgtaaatcaggcaaaagggaaacgtctaaaaactcagtgcagggcaa accaaagaaatcaaaatctacatcgaaatccagttcttcaacaaccaatcaaaatgccacttcgatcaatcctcagtcct caagcaatgacaaagggtcctcaaacaggcgtcctcattcctcattgagcagtctattaccctcaggtagaccccctctg ttgcctcagatcagctgtacagattcccagtcctcaatagattcccaacctagctcacagacctcaagtataagcactat gtcctcagctaggcctcctttaatgcctagacagacgagttgtacagattcccagtcctcagtggattcccagcctaatt cacagatcagtatcagctctatgtcctccgttgccagccttcctcctccggactttgtcctctatcctggcaaatttgat gttgtattatgtgtggataatcaggaattctatggcagcagacaagggggaggtaaatctttgctgccagacctgattaa aaatggagtaaattgtgaactgagaaagttacaggtgggagatttagtatgggtagctcaggagagagtagctcctattc caggtcagttggagatgtcaaaagggagagaactggttttagattttgtgatagaaaggaagaggatggatgacttggta tcaagttgtatggatgggagattggcagatcaaaaaatgcgtttgaagcagtgtggtttacgtcgccctatttttatggt agagaattacggatctatgcagcatttcagtattcctgaagaacggatccaacaaaccattacaaacctaaagaacaaga cactgtatgcctgcagtccagaaggtcttcaagaacttggtcaaagttttgacatcactgatgcagaattcagacttcag acttttgaacaatttagtaaaggatctgtaaaaacaaagaacctgtctgtacaggagatgtttgctaagcagctgataca ggtctgtggtgtgtccggggacagagctaagtctattaccaacaagtaccctactctctcacatctgatatcagcctatg acagctgtatgacccagaaagaaaaggagttcttactaagtaccatcaaaactaacaccaggtga |
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Protein
| Protein ID | pfu_aug2.0_1707.1_25102.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1707.1_25102.t1 DKMCKMLDDRLQKHIAQYGSAMPVANESSDDSDDVIPSCLPRVPQPRPTSRPTNPSNQRVAIDISDSDSDTASSNRQPDS QPKKKRQRSGSSGRGREYIPAYRSGPYAILIILYRNQQTPDSRSYMTKSELISEAQPLADTSFSLADPGSRYTAWSSMGS LIKKGLVIKESSPAKYSLTDAGCELAHKLEVVHAGGSPTLSAGSPRRPGVCSPATVTRPRISPASRANSTSVTGSAPGSS TSSDFQFTYVTDDDREVTDKGKAAVLIDDDDREVTDKGNAAVLIDDDIGVGFLIKCNYIKLLHTGKKYKLDTARPMGTDV YVYLQDIDAPDTCSTSSLPPLPSLTTDLDSENSDKNTCKSGKRETSKNSVQGKPKKSKSTSKSSSSTTNQNATSINPQSS SNDKGSSNRRPHSSLSSLLPSGRPPLLPQISCTDSQSSIDSQPSSQTSSISTMSSARPPLMPRQTSCTDSQSSVDSQPNS QISISSMSSVASLPPPDFVLYPGKFDVVLCVDNQEFYGSRQGGGKSLLPDLIKNGVNCELRKLQVGDLVWVAQERVAPIP GQLEMSKGRELVLDFVIERKRMDDLVSSCMDGRLADQKMRLKQCGLRRPIFMVENYGSMQHFSIPEERIQQTITNLKNKT LYACSPEGLQELGQSFDITDAEFRLQTFEQFSKGSVKTKNLSVQEMFAKQLIQVCGVSGDRAKSITNKYPTLSHLISAYD SCMTQKEKEFLLSTIKTNTR |
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