Gene
| Gene Model ID | pfu_aug2.0_1708.1_28473 |
|---|---|
| Locus | scaffold1708.1 : 40646 ... 56155 : - |
| To GenomeBrowser | scaffold1708.1:40646..56155 |
| Genes list of scaffold | scaffold1708.1 |
| Synonym | pfu_aug1.0_19883.1_61948 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1708.1_28473.t3 | 2 | 1 | Spy1 | 130 | 259 | 0.0 | 194.3 | 0.0 | 0.0 | 192.9 |
| pfu_aug2.0_1708.1_28473.t3 | 2 | 2 | Spy1 | 319 | 342 | 0.0 | 194.3 | 0.21 | 1500.0 | -0.9 |
Transcript
| Transcript ID | pfu_aug2.0_1708.1_28473.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1708.1_28473.t1 atgcagcatcagatgcatgggttcccctcagcatcccaagatgatgatgttgtacaagaatttttggacatggacagctg tttacggatatctgataagtatcttcttgcaatggtgtttgcttactttaagagggctcagctccgcatcagagaataca ccaggatgaatttctttgtagcactttacttggcaaatgacatggaggaggatgaggaggaagataaatatgaaatattt ccctgggctttaggacagaaatggaaagataaattcatcaaatttctgaggaagagagatctactttgggcaaaaattgg atatagggctgttgtaagcaagcgatgctgtgaagaaattatggcttttgatgctaccaaccctgcttggaagagaaatc gacccatacatcatgctggtgccatcaggaattatgctcgtgatcccgatgatgacggttacccgaggggaccaaatgcc tcgccccgtcgctgtggactatgtgataaggacagtcagtatgattcagccagccctgccagtgattcatggtacatctc ttctgatgattgttctccagctgtctctgcttcagatgataatggacctgcttggaagagaaatcgacccatacatcatg ctggtgccatcaggaattatgctcgtgatcctgatgatgacggttacccgaggggaccaaatgcctcgccccgtcgctgt ggactatgtgataaggacagtcagtatgattcagccagccctgccagtgattcatggtacatctcttctgatgattgttc tccagctgtctctgcttcagatgataatggagtttctcgattcaacatgaaaagactagagagaaacttgcctgatcaga attttgtatggccaacttgtgaagaataa |
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| Transcript ID | pfu_aug2.0_1708.1_28473.t2 |
| Definition | - |
>pfu_aug2.0_1708.1_28473.t2 atgtattccgcaagagaaaacaatattctttcaatttctcctacatcagcagcttatacaagtggaataaagtcgaacag ttgggctggtgaacacgaaaataaagcaaagaaacgtccgatatcgttaataagtgaaaaagtaaaggttgtcaagggac atgatatgcatgaagaatttatcaatgtggtagagaacgtacatctggacgatggtcgtcactttgattgtaattggcct gccaagaagcaaaagcggtttcctgcatttgatgtttcatgtaaccaaattgacttgacttccccttgcaatagctattc cagacttaaatcatgtataagtgagtcaacgcccaagaaaagacatggctttgttgtaaagggaaaggagatgagatcct ttttcaggctacttgatgatgatgttgtacaagaatttttggacatggacagctgtttacggatatctgataagtatctt cttgcaatggtgtttgcttactttaagagggctcagctccgcatcagagaatacaccaggatgaatttctttgtagcact ttacttggcaaatgacatggaggaggatgaggaggaagataaatatgaaatatttccctgggctttaggacagaaatgga aagataaattcatcaaatttctgaggaagagagatctactttgggcaaaaattggatatagggctgttgtaagcaagcga tgctgtgaagaaattatggcttttgatgctaccaaccctgcttggaagagaaatcgacccatacatcatgctggtgccat caggaattatgctcgtgatcccgatgatgacggttacccgaggggaccaaatgcctcgccccgtcgctgtggactatgtg ataaggacagtcagtatgattcagccagccctgccagtgattcatggtacatctcttctgatgattgttctccagctgtc tctgcttcagatgataatggacctgcttggaagagaaatcgacccatacatcatgctggtgccatcaggaattatgctcg tgatcctgatgatgacggttacccgaggggaccaaatgcctcgccccgtcgctgtggactatgtgataaggacagtcagt atgattcagccagccctgccagtgattcatggtacatctcttctgatgattgttctccagctgtctctgcttcagatgat aatggagtttctcgattcaacatgaaaagactagagagaaacttgcctgatcagaattttgtatggccaacttgtgaaga ataa |
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| Transcript ID | pfu_aug2.0_1708.1_28473.t3 |
| Definition | - |
>pfu_aug2.0_1708.1_28473.t3 atgtattccgcaagagaaaacaatattctttcaatttctcctacatcagcagcttatacaagtggaataaagtcgaacag ttgggctggtgaacacgaaaataaagcaaagaaacgtccgatatcgttaataagtgaaaaagtaaaggttgtcaagggac atgatatgcatgaagaatttatcaatgtggtagagaacgtacatctggacgatggtcgtcactttgattgtaattggcct gccaagaagcaaaagcggtttcctgcatttgatgtttcatgtaaccaaattgacttgacttccccttgcaatagctattc cagacttaaatcatgtataagtgagtcaacgcccaagaaaagacatggctttgttgtaaagggaaaggagatgagatcct ttttcaggctacttgatgatgatgttgtacaagaatttttggacatggacagctgtttacggatatctgataagtatctt cttgcaatggtgtttgcttactttaagagggctcagctccgcatcagagaatacaccaggatgaatttctttgtagcact ttacttggcaaatgacatggaggaggatgaggaggaagataaatatgaaatatttccctgggctttaggacagaaatgga aagataaattcatcaaatttctgaggaagagagatctactttgggcaaaaattggatatagggctgttgtaagcaagcga tgctgtgaagaaattatggcttttgatgctaccaaccctgcttggaagagaaatcgacccatacatcatgctggtgccat caggaattatgctcgtgatcccgatgatgacggttacccgaggggaccaaatgcctcgccccgtcgctgtggactatgtg ataaggacagtcagtatgattcagccagccctgccagtgattcatggtacatctcttctgatgattgttctccagctgtc tctgcttcagatgataatggaattatggcttttgatgctacaaaccctgcttggaagagaaatcgacccatacatcatgc tggtgccatcaggaattatgctcgtgatcctgatgatgacggttacccgaggggaccaaatgcctcgccccgtcgctgtg gactatgtgataaggacagtcagtatgattcagccagccctgccagtgattcatggtacatctcttctgatgattgttct ccagctgtctctgcttcagatgataatggagtttctcgattcaacatgaaaagactagagagaaacttgcctgatcagaa ttttgtatggccaacttgtgaagaataa |
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Protein
| Protein ID | pfu_aug2.0_1708.1_28473.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1708.1_28473.t1 MQHQMHGFPSASQDDDVVQEFLDMDSCLRISDKYLLAMVFAYFKRAQLRIREYTRMNFFVALYLANDMEEDEEEDKYEIF PWALGQKWKDKFIKFLRKRDLLWAKIGYRAVVSKRCCEEIMAFDATNPAWKRNRPIHHAGAIRNYARDPDDDGYPRGPNA SPRRCGLCDKDSQYDSASPASDSWYISSDDCSPAVSASDDNGPAWKRNRPIHHAGAIRNYARDPDDDGYPRGPNASPRRC GLCDKDSQYDSASPASDSWYISSDDCSPAVSASDDNGVSRFNMKRLERNLPDQNFVWPTCEE |
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| Protein ID | pfu_aug2.0_1708.1_28473.t2 |
| Definition | - |
>pfu_aug2.0_1708.1_28473.t2 MYSARENNILSISPTSAAYTSGIKSNSWAGEHENKAKKRPISLISEKVKVVKGHDMHEEFINVVENVHLDDGRHFDCNWP AKKQKRFPAFDVSCNQIDLTSPCNSYSRLKSCISESTPKKRHGFVVKGKEMRSFFRLLDDDVVQEFLDMDSCLRISDKYL LAMVFAYFKRAQLRIREYTRMNFFVALYLANDMEEDEEEDKYEIFPWALGQKWKDKFIKFLRKRDLLWAKIGYRAVVSKR CCEEIMAFDATNPAWKRNRPIHHAGAIRNYARDPDDDGYPRGPNASPRRCGLCDKDSQYDSASPASDSWYISSDDCSPAV SASDDNGPAWKRNRPIHHAGAIRNYARDPDDDGYPRGPNASPRRCGLCDKDSQYDSASPASDSWYISSDDCSPAVSASDD NGVSRFNMKRLERNLPDQNFVWPTCEE |
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| Protein ID | pfu_aug2.0_1708.1_28473.t3 |
| Definition | - |
>pfu_aug2.0_1708.1_28473.t3 MYSARENNILSISPTSAAYTSGIKSNSWAGEHENKAKKRPISLISEKVKVVKGHDMHEEFINVVENVHLDDGRHFDCNWP AKKQKRFPAFDVSCNQIDLTSPCNSYSRLKSCISESTPKKRHGFVVKGKEMRSFFRLLDDDVVQEFLDMDSCLRISDKYL LAMVFAYFKRAQLRIREYTRMNFFVALYLANDMEEDEEEDKYEIFPWALGQKWKDKFIKFLRKRDLLWAKIGYRAVVSKR CCEEIMAFDATNPAWKRNRPIHHAGAIRNYARDPDDDGYPRGPNASPRRCGLCDKDSQYDSASPASDSWYISSDDCSPAV SASDDNGIMAFDATNPAWKRNRPIHHAGAIRNYARDPDDDGYPRGPNASPRRCGLCDKDSQYDSASPASDSWYISSDDCS PAVSASDDNGVSRFNMKRLERNLPDQNFVWPTCEE |
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