Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1708.1_28475
Locus scaffold1708.1 : 63372 ... 68705 : -
To GenomeBrowser scaffold1708.1:63372..68705
Genes list of scaffold scaffold1708.1
Synonym pfu_aug1.0_94607.1_06210

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1708.1_28475.t1 gi|533129114|ref|XP_005379679.1| PREDICTED: C-type lectin domain family 7 member A [Chinchilla lanigera] 2.0e-08
pfu_aug2.0_1708.1_28475.t1 gi|156337284|ref|XP_001619847.1| hypothetical protein NEMVEDRAFT_v1g223756 [Nematostella vectensis] 6.0e-08
pfu_aug2.0_1708.1_28475.t1 gi|156405188|ref|XP_001640614.1| predicted protein [Nematostella vectensis] 7.0e-08
pfu_aug2.0_1708.1_28475.t1 gi|554887583|ref|XP_005953298.1| PREDICTED: galactose-specific lectin nattectin-like, partial [Haplochromis burtoni] 8.0e-08

Transcript
Transcript IDpfu_aug2.0_1708.1_28475.t1
Definition-
>pfu_aug2.0_1708.1_28475.t1
atgacggacgccggacgccggacggtgcgctttgacaatagctcatacgagcttcgctcagtcaattcccagcaacaaag
ctgtccgcctgggtggttacaattccaaacttcctgttatgatttcattcttgatgcgccaaatgattggactgaatctg
agtacctttgttctctgcttggtgcccatttggtggaaatagagacgattcaggagaacaatttcgtgaaaggacaggcc
caaaaactaatcaacagtacgattatcactacaaacaacttttag

Protein
Protein IDpfu_aug2.0_1708.1_28475.t1
Definition-
>pfu_aug2.0_1708.1_28475.t1
MTDAGRRTVRFDNSSYELRSVNSQQQSCPPGWLQFQTSCYDFILDAPNDWTESEYLCSLLGAHLVEIETIQENNFVKGQA
QKLINSTIITTNNF

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495