Gene
| Gene Model ID | pfu_aug2.0_1709.1_31858 |
|---|---|
| Locus | scaffold1709.1 : 12596 ... 32375 : + |
| To GenomeBrowser | scaffold1709.1:12596..32375 |
| Genes list of scaffold | scaffold1709.1 |
| Synonym | pfu_aug1.0_6562.1_16947 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1709.1_31858.t1 | 2 | 1 | NACHT | 245 | 300 | 9.4e-12 | 44.8 | 0.37 | 1800.0 | -1.6 |
| pfu_aug2.0_1709.1_31858.t1 | 2 | 2 | NACHT | 363 | 534 | 9.4e-12 | 44.8 | 1.6e-14 | 7.9e-11 | 41.8 |
Transcript
| Transcript ID | pfu_aug2.0_1709.1_31858.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1709.1_31858.t1 atgagtgtagatgacgaggtacgttacggtcgaacatgttcacttgttttgaacaagagtgttaatgtcctgagacgtgt tgtagaacattcctacacaacacaaggagcaccgagttttgaggtgttcttgaacaacaacaggcatgccctgtttcatc tcttatttaagcattgctgctgtggcaacaacagtacagtaacaccactgagcagataccagtggcagttactgtacgtc cgtacgtcaacaaggaatccacacggacggcgtggagaatgttcatgtcagtatgcagccataagtggagtgacgccaga cgtaatggacgtctccctctgttgtttggtgctgcataatatttgttccggtgtcagcttgtcagacgtcgatacaatca gagatgtccgtaaccaattgatacatgccagcaacgctagtctagatgccactctatatttagccacatggagtaaagtt gaagcagctatgcttaatctggcacagggagtgtctacttcattcagaagtgatatcattagtgctgtccaaaccctgaa aaatcgattgatagatacaagtgaactttccgcactaaaggatctggtcatggatgaaaaaagaatttctgaaatagaga agatacaagatgctacgaaagtggaattggcgcagcacaaagaaagattctgtcatgttgagcatgaaatcgaaattata cagaaagatcaagctgctctgatgtcaggaatattgcaacaaaaagactttccaggtaaacttaagtttcatatttcatt tgtagaagagaagacagaagaacttaaacagaccttacttgagtcatatgaaaaagcaacacaaaagatccaggtttctc ctcttcagaagaaagctaaaaagcttccacttgacatgatatttgctcctgttgtgataaggcaagatttagaggacaaa accacagagtctgatctagaggacaaagccacaatgtcaaatcaggatgattccaaacccaacgtgaagactcagcaagt aagaaatccaaaagacatgttttacaagaatgataaacctgtccgacatatttttatgcagggggaagcagcacatggga aaacagtattttgcaaacaactgttacaaaattggtgtacatctaagcaggttggagcaattaatgaggacctcacagac tgggaaaaaagtcttgatgaatatgactttgttttctttgttatgtttcgtctggctaacaaaaatacaatttcaatcga ccagatgattcttgatgaactttcacagcatagcccagagtgtgttgaagcgattcgtcatgtcctgtccaatagaaagt atcgttgtttgattataatggatggtctagacgagtggaggatatctcaaaagcagagaaaaaacctgagacataaaaga tttcctaatactggaaatttatcaaagagctgttcccttttcatcaccttcagaccatgggtgtatgatgtcatagcaga tctgatggaagattgtgacagagttgttgatatttgtggattagatgaaaaggggattacccttctgattgagaagatgc ttatcaacttctacaacatggatacagcaagtgaacaatacaatgagacaagggagaaaatgatcaagaagtcaaaagat gaaaatcttaagtctatcatggagatacctttgttgttaacagcgtctgtgatgttgtggtttgagaaagaacagactga tttgggaagcatgacaaatttttacatatccctggtacagcttttgataaagagagcgatggatacagaatcattggatg aagatctcatagagaggcttgtgaaaaagccaacttctgggatacaaataccaagcatcttacaaaaggctagaaataaa acagtgcggagatttattgatgtgttaaataccctggggaaattggcctatgatgaccttctatctgatgaaaccaattt agtgtttgggaaggaagaattggaggacaagatagatgaagataatatggagtttgccttgagagtaggacttctgagtc aatgtgaggcacctggatgttttgacgaggaaaatgttagtgtcaactttttccacaagactgttcaggagtttcttgca gccttacatgttatatgcaatgttgaagagattttaaaggagttttgctgtcaccttcagagtatagatagactgtttga tttatctaatgtagtaatgttcctttctgggctgtcaccatctgttggtgatgatctgtcaaagcatgtagcatgtcttt cagataaggactctgaaatatgcagataccgggaaacgttttcaggtccttcgttcaaagttctttggctttacaagttc caaatccgttgttatcaggaaatgataaatgatgaaacagtactggctgatggacatgaggtcattggatttcatgggaa agatatcattttagatctggtacccgatgcaagtacaattcaatgcacttctgaaatactgggacatcatccccatgttt caactttgaatctatatcaatgtataaatgggctttcagagtttttggcaagctgtgaaacattacattctattttcctt ggtggtcctctgaagacaatttccaattttggaaagtgccttccccttaaacatttgtgtttgaatcaagtcatgctcac agacgatgcctcttatgggatagttcattctgtaaagtcaagtctacatttgaggacgctgaatcttctcaatgttacac taaattcaaaatcagactgtgcatcacttacgtctcaaagctcttgggtccatgatttactccatgtacttccaaattgt ctaaagttgacgaaattacatattgattgcaaaacactacaaagtaaggaaaatgcagtcctgttgatgacagtgcttcc gacacttagaaatctagattatttttattacaagggaagcagtaacatgagtcctgtagtactcagtttatttgaacgta gtttgaaatttggaaacagtttgaaaaatgtatgtcaacttagacatctgatagtacagcaaataaatctaaggaatttt ccaccacagcctgaggaagtaaacaggtacttcttaataccaagaaacccatttcttggaaagaatatgaacactttgcc atgtacatgtacaaatttatccctgccgaaaaaggtcatggttgatcaaagactttgctattatcagccatttcgattct tttcattaagagaagacaatttcttagaattgacttcagtatggacaaacttagggaagctggaattattctttgttttt atggcaccatttggctggtacaagtttttgatctcacttctggagataagccatgggtttaatgttgtactccaaggtac agatattgatgaagaaacagtcagtatggtccgttcatgtcccttcttcttgataagaagggaaatagcacaaccactat tctctaatacttttgaatttaccaggatatag |
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Protein
| Protein ID | pfu_aug2.0_1709.1_31858.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1709.1_31858.t1 MSVDDEVRYGRTCSLVLNKSVNVLRRVVEHSYTTQGAPSFEVFLNNNRHALFHLLFKHCCCGNNSTVTPLSRYQWQLLYV RTSTRNPHGRRGECSCQYAAISGVTPDVMDVSLCCLVLHNICSGVSLSDVDTIRDVRNQLIHASNASLDATLYLATWSKV EAAMLNLAQGVSTSFRSDIISAVQTLKNRLIDTSELSALKDLVMDEKRISEIEKIQDATKVELAQHKERFCHVEHEIEII QKDQAALMSGILQQKDFPGKLKFHISFVEEKTEELKQTLLESYEKATQKIQVSPLQKKAKKLPLDMIFAPVVIRQDLEDK TTESDLEDKATMSNQDDSKPNVKTQQVRNPKDMFYKNDKPVRHIFMQGEAAHGKTVFCKQLLQNWCTSKQVGAINEDLTD WEKSLDEYDFVFFVMFRLANKNTISIDQMILDELSQHSPECVEAIRHVLSNRKYRCLIIMDGLDEWRISQKQRKNLRHKR FPNTGNLSKSCSLFITFRPWVYDVIADLMEDCDRVVDICGLDEKGITLLIEKMLINFYNMDTASEQYNETREKMIKKSKD ENLKSIMEIPLLLTASVMLWFEKEQTDLGSMTNFYISLVQLLIKRAMDTESLDEDLIERLVKKPTSGIQIPSILQKARNK TVRRFIDVLNTLGKLAYDDLLSDETNLVFGKEELEDKIDEDNMEFALRVGLLSQCEAPGCFDEENVSVNFFHKTVQEFLA ALHVICNVEEILKEFCCHLQSIDRLFDLSNVVMFLSGLSPSVGDDLSKHVACLSDKDSEICRYRETFSGPSFKVLWLYKF QIRCYQEMINDETVLADGHEVIGFHGKDIILDLVPDASTIQCTSEILGHHPHVSTLNLYQCINGLSEFLASCETLHSIFL GGPLKTISNFGKCLPLKHLCLNQVMLTDDASYGIVHSVKSSLHLRTLNLLNVTLNSKSDCASLTSQSSWVHDLLHVLPNC LKLTKLHIDCKTLQSKENAVLLMTVLPTLRNLDYFYYKGSSNMSPVVLSLFERSLKFGNSLKNVCQLRHLIVQQINLRNF PPQPEEVNRYFLIPRNPFLGKNMNTLPCTCTNLSLPKKVMVDQRLCYYQPFRFFSLREDNFLELTSVWTNLGKLELFFVF MAPFGWYKFLISLLEISHGFNVVLQGTDIDEETVSMVRSCPFFLIRREIAQPLFSNTFEFTRI |
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