Gene
| Gene Model ID | pfu_aug2.0_1709.1_31860 |
|---|---|
| Locus | scaffold1709.1 : 71696 ... 92445 : - |
| To GenomeBrowser | scaffold1709.1:71696..92445 |
| Genes list of scaffold | scaffold1709.1 |
| Synonym | pfu_aug1.0_128324.1_42625 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1709.1_31860.t1 | 2 | 1 | Thi4 | 77 | 115 | 4.0e-06 | 26.0 | 1.4e-08 | 1.1e-05 | 24.6 |
| pfu_aug2.0_1709.1_31860.t1 | 1 | 1 | Pyr_redox | 78 | 112 | 5.0e-06 | 26.8 | 1.7e-08 | 1.3e-05 | 25.4 |
| pfu_aug2.0_1709.1_31860.t1 | 1 | 1 | DAO | 79 | 115 | 4.2e-08 | 32.4 | 8.4e-11 | 6.5e-08 | 31.8 |
| pfu_aug2.0_1709.1_31860.t1 | 1 | 1 | FAD_binding_2 | 79 | 119 | 5.1e-07 | 28.8 | 9.9e-10 | 7.8e-07 | 28.2 |
| pfu_aug2.0_1709.1_31860.t1 | 1 | 1 | Pyr_redox_2 | 79 | 119 | 4.8e-06 | 26.5 | 9.8e-09 | 7.7e-06 | 25.9 |
| pfu_aug2.0_1709.1_31860.t1 | 1 | 1 | NAD_binding_8 | 81 | 134 | 5.0e-13 | 48.8 | 1.7e-15 | 1.3e-12 | 47.5 |
| pfu_aug2.0_1709.1_31860.t1 | 3 | 1 | Amino_oxidase | 86 | 183 | 0.0 | 158.5 | 1.6e-15 | 1.3e-12 | 47.6 |
| pfu_aug2.0_1709.1_31860.t1 | 3 | 2 | Amino_oxidase | 208 | 242 | 0.0 | 158.5 | 0.64 | 500.0 | -0.6 |
| pfu_aug2.0_1709.1_31860.t1 | 3 | 3 | Amino_oxidase | 327 | 559 | 0.0 | 158.5 | 7.3e-34 | 5.7e-31 | 108.0 |
| pfu_aug2.0_1709.1_31860.t1 | 2 | 2 | Thi4 | 545 | 559 | 4.0e-06 | 26.0 | 3.1 | 2500.0 | -2.7 |
Transcript
| Transcript ID | pfu_aug2.0_1709.1_31860.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1709.1_31860.t1 atgcataaggtagggggatcgaacgacctcaagaaacttcttcgatcagctccttccaatagcgatgaattgccgataca ttcgaagccaacgttccttcaacaagatgactctgctaaacaattcttcttggatattggagaaaaaggactgcgttatg cctgggcgaagtatttcttaaaggtcgtgaatccagaagactttgcgaggacgaaaactgactcaccgaaaaacattgtc atcgttggagctggtttcgccggactctcagcagcttatgagcttgtacaagtcggacacaaggtcactattgtggaatt acaaaatagagtcggaggtagagccaagacaattcatcatggcttttcggaaggtctccacgctgaaggaggtgcaatga gactaccattaaaggaacatttcatgacaaaccactacatccaccttctaggcgttccataccggaagtttcaaaacaca aatgaaaccaataatacgtggattaatctatttggcaaaaacataaggatgcaagagtgggaagaaaataacctagaaca tctctcagacttttacccagaggcagcatctttcatcaaaagccatggtctggagagcattgatgacctatataagaaaa ccataaaacctgtcaagaaagacttaggaaaacatcctagtgtacaagattggaaaaagtgggtggagagatggagcaag tactcagtcgaatcattcttgagagatggtaaagcgttgaatgacgatggattgagaccttggcccgaagatgcaatcca agcgtataaggtgactgcatattcgccaatgacagataggagtttagtagagatcttgagagaagacattgggaaatggt ggtttgattgcttatggactcctgtggctggaatgcagagcttcgccgaaaaattcatggagaggtctcttggttggaac catgatgttttcctgtccgacaacataaactatgggaaaagagttaatactattacaatgaccaagaatgggatttcagt ttccggtagatctacctttacaggaggagaatttagtttcagtggtgacgcaggtattatcactctgcctctgcccgttc tcagacaagttacaattgaagacaaaaccgatagtatgaacctattcaaagtccgaaaagtcctctcaaatgttcattac gaaccgtcaaccaagatactactccaatgcaagacccgcttttgggagaaagatgtaggaactgggggattttccaaaac gaatcttccaatcggtcagattcattatccaggtgatgaaaaccgcctcccaaatacagacagaggaatccttctcagtt acacttggggtcaggacgcaatcatgcttggagctcaaccagaacaagaggctgtgactagtgcagttcgccagttgaaa agtattcatcctgatatagaaaaatactttgaggtgggaagggttcaagcttggaccagggacccttctgcgcagttggc ttttacatatctgaatccaagtcagtaccaatactccttggagaccttattgatgacagatacccatccgttataccttg ccggtgaggccttgtcatggacgcatgcatggattcaaggcgctctagagtctggattgagggccgcttataacatattc tgcaaatatgaaaaaccaccatccacgatggagtcgaaaaaactaaaatga |
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Protein
| Protein ID | pfu_aug2.0_1709.1_31860.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1709.1_31860.t1 MHKVGGSNDLKKLLRSAPSNSDELPIHSKPTFLQQDDSAKQFFLDIGEKGLRYAWAKYFLKVVNPEDFARTKTDSPKNIV IVGAGFAGLSAAYELVQVGHKVTIVELQNRVGGRAKTIHHGFSEGLHAEGGAMRLPLKEHFMTNHYIHLLGVPYRKFQNT NETNNTWINLFGKNIRMQEWEENNLEHLSDFYPEAASFIKSHGLESIDDLYKKTIKPVKKDLGKHPSVQDWKKWVERWSK YSVESFLRDGKALNDDGLRPWPEDAIQAYKVTAYSPMTDRSLVEILREDIGKWWFDCLWTPVAGMQSFAEKFMERSLGWN HDVFLSDNINYGKRVNTITMTKNGISVSGRSTFTGGEFSFSGDAGIITLPLPVLRQVTIEDKTDSMNLFKVRKVLSNVHY EPSTKILLQCKTRFWEKDVGTGGFSKTNLPIGQIHYPGDENRLPNTDRGILLSYTWGQDAIMLGAQPEQEAVTSAVRQLK SIHPDIEKYFEVGRVQAWTRDPSAQLAFTYLNPSQYQYSLETLLMTDTHPLYLAGEALSWTHAWIQGALESGLRAAYNIF CKYEKPPSTMESKKLK |
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