Gene
| Gene Model ID | pfu_aug2.0_171.1_03735 |
|---|---|
| Locus | scaffold171.1 : 1 ... 33434 : + |
| To GenomeBrowser | scaffold171.1:1..33434 |
| Genes list of scaffold | scaffold171.1 |
| Synonym | pfu_aug1.0_428.1_07531 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_171.1_03735.t1 | 3 | 1 | DEAD_2 | 9 | 92 | 6.9e-28 | 97.2 | 2.8e-31 | 6.9e-28 | 97.2 |
| pfu_aug2.0_171.1_03735.t1 | 3 | 1 | Helicase_C_2 | 372 | 554 | 0.0 | 183.1 | 0.0 | 0.0 | 181.9 |
| pfu_aug2.0_171.1_03735.t1 | 3 | 2 | Helicase_C_2 | 622 | 682 | 0.0 | 183.1 | 1.8 | 4300.0 | -2.6 |
| pfu_aug2.0_171.1_03735.t1 | 3 | 3 | Helicase_C_2 | 707 | 745 | 0.0 | 183.1 | 0.95 | 2400.0 | -1.7 |
| pfu_aug2.0_171.1_03735.t1 | 3 | 2 | DEAD_2 | 711 | 736 | 6.9e-28 | 97.2 | 0.81 | 2000.0 | -2.0 |
| pfu_aug2.0_171.1_03735.t1 | 3 | 3 | DEAD_2 | 828 | 848 | 6.9e-28 | 97.2 | 1.0 | 2500.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_171.1_03735.t1 | gi|524883851|ref|XP_005098551.1| | PREDICTED: regulator of telomere elongation helicase 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_171.1_03735.t1 | gi|699704153|ref|XP_009891868.1| | PREDICTED: regulator of telomere elongation helicase 1 [Charadrius vociferus] | 0.0 |
| pfu_aug2.0_171.1_03735.t1 | gi|677966913|ref|XP_009069555.1| | PREDICTED: regulator of telomere elongation helicase 1, partial [Acanthisitta chloris] | 0.0 |
| pfu_aug2.0_171.1_03735.t1 | gi|701403322|ref|XP_009997011.1| | PREDICTED: regulator of telomere elongation helicase 1 [Chaetura pelagica] | 0.0 |
| pfu_aug2.0_171.1_03735.t1 | gi|694859847|ref|XP_009471700.1| | PREDICTED: regulator of telomere elongation helicase 1 [Nipponia nippon] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_171.1_03735.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_171.1_03735.t1 atataaaaagaaacagcgaaatcagaagcctgatgggtgatgttgttgacatagaggacatagttacttatggagaaaaa cagagggtttgtccatactacatgacgagagaattgaagagtgatgcagacattattttcatgccatacaattacttact agatccaaagatgagaatgaatcaaggaatagaaatacaaggaaatgttctgatatttgatgaagctcacaatttggaga ggatatgtgaagacagttcctcttttgagttgacccctggtgacctggctactgccatggaggaactaactaagctggca caaaaaatgttagaaatggccaaaaatgaggaccaaagcctggtggaggacactgaatcaggatctatgccagagccaga attcacactggaggatgttttaaagttgaaaagtacattagtagatcttgagaaagaaatagatgaaatagaggtgctta atacagataaagggctgactaaaccaggagtatttattttcgaactgttcaataaagtccatattggatttgagtccaag aattatttaattgacctctttgagaagatgatttcattcgtctccactgatgcggctggtgtgacagtactgtctaaagg ttcaggactcactaaaatagtggacgtcataaagattacattcagccgagactttaacggaacctcaatgaatgcacatc aagaggctttatcaaagtcctacaaggttcacatacaaccagctccacagaacaaccagaagaaaaaaatggacacgtgg acaacctcctcaaaacctacaaaatctggaaagaccctatgttattggtgttttagccctggacataggatgttagatct ggtgtcatgtggtgtgaagtgtattattctgaccagcggaaccctctcacctctaaaatctttcacagcagaaatgcaaa tagaattccctataaccttggagaatccccatgtaatagaaaaacatcagatctttgtgggatcaatgggaaagggacca gataacacagttctcaactctaactatgaaacaaggttcaaagaaagttatcagtcatctcttggaaaagctgtggttaa tttttctagaatagttccgaagggattacttatattcttcccatcctatcctgtcatggaaaagtgtattgaaaattggc agagtaatggtatctataacagcatatcacagtataaagctatatatgtggagcctcgagggaaaggtttacttgatgat gtaatggatgaattttatgataagatcaacaacccagctcttaatggtgcgatatttgctgctgtgtgcagaggaaaggt gagtgaaggactggacttctctgatgacaatggtcgggctgtcattattaccggtctgccttacccaccgagaatggatc ccaaagtcaacctcaaaatgcagttcctggatgaaatgaggaacaaaaacaagttcaagagtttaacaggtcaggagtgg tatcgccagcaggcatcgcgagccgttaatcaggccataggacgtgtgatcagacatagacaagacttcggtgctattct attatgtgatactagattttctgcagcctctgctgtttcacagcttcctttatgggtgaagcctcatgttaaaaattatg atatgtttggaaagattattaaagacgtcattgttttcttcaagactacagagctgaagatgccagctgttgctccgagg gcgaaaatacgaggacattccacaacacctgccacctcccattttatgccaactatgagcagagtgtcggctacaacatc aaccaaggctagaaatgtcacagatcatgtccctagtctcaaagctgaagaagtctctgtagagaagttgaggacgcagt atgatggtggatctgccataagttttagtacaggtgctaagactggactgcttgaagcattaagttcatcaaagctgtca aaaacatctgacatgaagaaaatgccaggaagaaagaagatcattgtcaagaagaaagatgattcatcagaagttgtgat gtcgaagcaatttgaaaatgtaacgacagtgaaaaagaacttaaaaacagctgaggaatatattcaagagctgtcaaaaa catctgacatgaagaaaatgccaggaagaaagaagatcatagtcaagaagaaagatgattcatcagaagttgtgatgtcg aagcaatttgaaaatgtaacgacagtgaaaaagaacttgaaaacagctgaggaatatattcaagagataaagaaaagatt gagtaaggaacagtataaagaattttctactgctcttgtaagctacaagtcaagtggagattttggaaagtttgccacac ttttggtccgtctgtttactagaaaagaagaggatttcaatgttctcagacagttttatcgtttcattagaccaaaggac aaagagagatttaatgagttatgtcgggacctaacaggatcgagctgtggttataagcctgaagatggcatatcaagaaa acgtgtactaacagatactgaaaacataggttcatcttcagatcagatacaaccagagaaacgtttgagagggatcacag aaaatgtggaagtgaacacttgtacgaaatcagactgcacagttaatgttttgggatctacatgtacagtcactcaaact gaaagtctgaaaaactgtgatacattacaaaatacaagcgtgactgtgaatgacaatgatgggccttcatcacaaaaact acatgaaaacagagatccctctactagacctgcagaagatacaggcctgtaa |
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Protein
| Protein ID | pfu_aug2.0_171.1_03735.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_171.1_03735.t1 IKRNSEIRSLMGDVVDIEDIVTYGEKQRVCPYYMTRELKSDADIIFMPYNYLLDPKMRMNQGIEIQGNVLIFDEAHNLER ICEDSSSFELTPGDLATAMEELTKLAQKMLEMAKNEDQSLVEDTESGSMPEPEFTLEDVLKLKSTLVDLEKEIDEIEVLN TDKGLTKPGVFIFELFNKVHIGFESKNYLIDLFEKMISFVSTDAAGVTVLSKGSGLTKIVDVIKITFSRDFNGTSMNAHQ EALSKSYKVHIQPAPQNNQKKKMDTWTTSSKPTKSGKTLCYWCFSPGHRMLDLVSCGVKCIILTSGTLSPLKSFTAEMQI EFPITLENPHVIEKHQIFVGSMGKGPDNTVLNSNYETRFKESYQSSLGKAVVNFSRIVPKGLLIFFPSYPVMEKCIENWQ SNGIYNSISQYKAIYVEPRGKGLLDDVMDEFYDKINNPALNGAIFAAVCRGKVSEGLDFSDDNGRAVIITGLPYPPRMDP KVNLKMQFLDEMRNKNKFKSLTGQEWYRQQASRAVNQAIGRVIRHRQDFGAILLCDTRFSAASAVSQLPLWVKPHVKNYD MFGKIIKDVIVFFKTTELKMPAVAPRAKIRGHSTTPATSHFMPTMSRVSATTSTKARNVTDHVPSLKAEEVSVEKLRTQY DGGSAISFSTGAKTGLLEALSSSKLSKTSDMKKMPGRKKIIVKKKDDSSEVVMSKQFENVTTVKKNLKTAEEYIQELSKT SDMKKMPGRKKIIVKKKDDSSEVVMSKQFENVTTVKKNLKTAEEYIQEIKKRLSKEQYKEFSTALVSYKSSGDFGKFATL LVRLFTRKEEDFNVLRQFYRFIRPKDKERFNELCRDLTGSSCGYKPEDGISRKRVLTDTENIGSSSDQIQPEKRLRGITE NVEVNTCTKSDCTVNVLGSTCTVTQTESLKNCDTLQNTSVTVNDNDGPSSQKLHENRDPSTRPAEDTGL |
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