Gene
| Gene Model ID | pfu_aug2.0_171.1_03737 |
|---|---|
| Locus | scaffold171.1 : 63536 ... 89066 : + |
| To GenomeBrowser | scaffold171.1:63536..89066 |
| Genes list of scaffold | scaffold171.1 |
| Synonym | pfu_aug1.0_428.1_07529 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| homeobox protein | GO:0003700 GO:0005634 GO:0006355 GO:0007517 GO:0043565 GO:0048813 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_171.1_03737.t1 | 3 | 1 | Homeobox | 49 | 105 | 3.6e-24 | 84.1 | 2.5e-28 | 3.6e-24 | 84.1 |
| pfu_aug2.0_171.1_03737.t1 | 3 | 2 | Homeobox | 232 | 240 | 3.6e-24 | 84.1 | 0.41 | 6100.0 | -3.1 |
| pfu_aug2.0_171.1_03737.t1 | 3 | 3 | Homeobox | 250 | 280 | 3.6e-24 | 84.1 | 0.4 | 5900.0 | -3.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_171.1_03737.t1 | gi|242009008|ref|XP_002425285.1| | homeobox protein arx, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_171.1_03737.t1 | gi|498989226|ref|XP_004531555.1| | 0.0 | |
| pfu_aug2.0_171.1_03737.t1 | gi|195148028|ref|XP_002014976.1| | GL18665 [Drosophila persimilis] | 0.0 |
| pfu_aug2.0_171.1_03737.t1 | gi|195117252|ref|XP_002003163.1| | GI23866 [Drosophila mojavensis] | 0.0 |
| pfu_aug2.0_171.1_03737.t1 | gi|751451767|ref|XP_011180225.1| | PREDICTED: homeobox protein aristaless [Bactrocera cucurbitae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_171.1_03737.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_171.1_03737.t1 atgttttgtttccattgtcccccggccctacaccccgctgccagacagtttggaatggaccttgcctaccaacatcatca tccatacgctgggtatgggctagccggagaattccaagatgacagttttgcgagaagaaagcaaaggagaaacagaacaa ctttcactttacaacagttggaagagttggagaaagcgttcgcacaaacacattaccctgacgtctttacgagggaggac cttgccatgaggatcaatttgacagaagcccgcgttcaggtatggtttcaaaacagacgtgcgaaatggagaaaaagtga acgattcactcaacaacaaaaaccaggaactagcagtaatgccgacagcgacgaggaaacaaactacgacatagaatcaa agtcacgtgacaatcacgatccagagtcagagaaagtcacgagctctgacccgtcaaacgataccgaccttcaatcaaga actttcattgacgtcatttccacacatactgatgaaagtaatagttgtgacgatagtatatttgaaaagcatggcgacac agagagaaaagaggttgagagtgattctgaaattagtgatcccaacttgaatgacattgtaaccacgagttgtaacaaga tatcggtcattgagcacagtgaaactacttcagaacacgaaagtaaagagctgaaattcgaacaaaagcaagaaattgct tcaccggatattgaacaatcaagagaaaatgaagaaaacttgaccgttgaaaaaagagaaaatactattgctaagactga taacggtgccatcagtaccactgccgtatcgaacaccttttccaattcttttccgggaatgtgtccatcgtcgtcaatgt tgatgaacatggcaaatcactcacaggatagcatgatgctgaacaagccgccatatttccaaccgtcatttgtacagacc ctcctggctttaaacagcaacgccgtcaacagacatagcatgatgccttttatggaaggatcgtcttacaaaagttacct tgaaaatatctttggagctcctcgacattttctctctcagatgacacatccagcgtttaaaagtctggttaacgtcacgg gcagtgtaaattgtgacacgtga |
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Protein
| Protein ID | pfu_aug2.0_171.1_03737.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_171.1_03737.t1 MFCFHCPPALHPAARQFGMDLAYQHHHPYAGYGLAGEFQDDSFARRKQRRNRTTFTLQQLEELEKAFAQTHYPDVFTRED LAMRINLTEARVQVWFQNRRAKWRKSERFTQQQKPGTSSNADSDEETNYDIESKSRDNHDPESEKVTSSDPSNDTDLQSR TFIDVISTHTDESNSCDDSIFEKHGDTERKEVESDSEISDPNLNDIVTTSCNKISVIEHSETTSEHESKELKFEQKQEIA SPDIEQSRENEENLTVEKRENTIAKTDNGAISTTAVSNTFSNSFPGMCPSSSMLMNMANHSQDSMMLNKPPYFQPSFVQT LLALNSNAVNRHSMMPFMEGSSYKSYLENIFGAPRHFLSQMTHPAFKSLVNVTGSVNCDT |
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