Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_171.1_03745
Locus scaffold171.1 : 283070 ... 298582 : +
To GenomeBrowser scaffold171.1:283070..298582
Genes list of scaffold scaffold171.1
Synonym pfu_aug1.0_48377.1_12657

Manual annotation
Annotation by Blast2GO
Annotation GO
glutamine: fructose-6-phosphate GO:0004044 GO:0004360 GO:0016051 GO:0030246 GO:1901137

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_171.1_03745.t1 3 1 SIS 117 181 6.2e-35 119.6 1.8e-15 1.3e-11 44.1
pfu_aug2.0_171.1_03745.t1 3 2 SIS 210 276 6.2e-35 119.6 1.8e-20 1.4e-16 60.3
pfu_aug2.0_171.1_03745.t1 3 3 SIS 321 346 6.2e-35 119.6 2.7e-05 0.2 11.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_171.1_03745.t1 gi|241655485|ref|XP_002411390.1| glutamine: fructose-6-phosphate aminotransferase, putative [Ixodes scapularis] 0.0
pfu_aug2.0_171.1_03745.t1 gi|390179158|ref|XP_003736822.1| GA26267, isoform B [Drosophila pseudoobscura pseudoobscura] 0.0
pfu_aug2.0_171.1_03745.t1 gi|62862030|ref|NP_001015162.1| Glutamine:fructose-6-phosphate aminotransferase 1, isoform F [Drosophila melanogaster] 0.0

Transcript
Transcript IDpfu_aug2.0_171.1_03745.t1
Definition-
>pfu_aug2.0_171.1_03745.t1
atgaaagctagctgctccatctacaagttcatcagttcctattcatatttaagtgcaataattgagcatacagatcaagt
tatatatttggaggatgatgatgttgcagcagtatgtaatggttgtcttaccattcaccgaattaaacgtgaggtggacg
agtctacgatacgagaagtcatcacactcaaaatggagatccaacaaatcatgaaaggaagctttggatcatttatgcag
aaagagatttttgaacagcctgagtctgtagtgaacacgatgagaggtcgtgtgaactttgaagagaaccttgttgtact
cggtggcattaaggactatatgtcagagatcaggcggtgtagaagacttctatttatagcatgtggtaccagcttccaca
gtgctgttgctacacgacaattgttggaagaattaacagagttaccagttatggtagaacttgccagtgacttcttggac
agacagacacctgtgttcagagatgacgtctgcttcttcatcagccagtctggtgattgggacatcacacaaaattattt
aaaatttgagtacatgtatcggacacaaaatgattgccacatgtacagcttatgtgagggaaatggttactcaggggaga
cggcagacacgttgatggctttacggtactgtaaacagaggggtgccctcattgtgggtatcacaaacactgtaggtagc
agtatttgccgagaatctcactgtggtgtacatatcaatgcaggaccagaaataggtgtggccagtacaaaggcatatac
cagtcagtttatctcccttgtgatgtttgggttagtgatgtgtgaggacagaatctctatgcagacaaggaggaaagaaa
tcatccaaggactcaagaatctccctgatcagatcaaagaagttcttaaacttgacgagcatataaattccctcgcacaa
gaattgtaccagcagaagagtttactagtgatgggcaggggatataacttcgccacatgtctagaaggggccttagtaaa
aaatcaaagaattgacgtacatgcattcagaaggtataatggctggagagttaaagcacggccccttggcgttagtggac
aaggctatgccagtaatgatggtggtgaccagagataa

Protein
Protein IDpfu_aug2.0_171.1_03745.t1
Definition-
>pfu_aug2.0_171.1_03745.t1
MKASCSIYKFISSYSYLSAIIEHTDQVIYLEDDDVAAVCNGCLTIHRIKREVDESTIREVITLKMEIQQIMKGSFGSFMQ
KEIFEQPESVVNTMRGRVNFEENLVVLGGIKDYMSEIRRCRRLLFIACGTSFHSAVATRQLLEELTELPVMVELASDFLD
RQTPVFRDDVCFFISQSGDWDITQNYLKFEYMYRTQNDCHMYSLCEGNGYSGETADTLMALRYCKQRGALIVGITNTVGS
SICRESHCGVHINAGPEIGVASTKAYTSQFISLVMFGLVMCEDRISMQTRRKEIIQGLKNLPDQIKEVLKLDEHINSLAQ
ELYQQKSLLVMGRGYNFATCLEGALVKNQRIDVHAFRRYNGWRVKARPLGVSGQGYASNDGGDQR

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495