Gene
| Gene Model ID | pfu_aug2.0_171.1_03747 |
|---|---|
| Locus | scaffold171.1 : 334810 ... 341354 : + |
| To GenomeBrowser | scaffold171.1:334810..341354 |
| Genes list of scaffold | scaffold171.1 |
| Synonym | pfu_aug1.0_18501.1_61828 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| guanine nucleotide-binding protein subunit alpha-13-like | GO:0003924 GO:0004871 GO:0005525 GO:0005834 GO:0005925 GO:0006928 GO:0007189 GO:0007266 GO:0007275 GO:0009653 GO:0030168 GO:0031526 GO:0031584 GO:0031683 GO:0031702 GO:0031752 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_171.1_03747.t1 | 1 | 1 | G-alpha | 4 | 163 | 2.0e-37 | 128.8 | 7.00005e-41 | 2.6e-37 | 128.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_171.1_03747.t1 | gi|676431157|ref|XP_009046158.1| | hypothetical protein LOTGIDRAFT_137888 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_171.1_03747.t1 | gi|524869593|ref|XP_005091588.1| | PREDICTED: guanine nucleotide-binding protein subunit alpha-13-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_171.1_03747.t1 | gi|585669428|ref|XP_002735663.2| | PREDICTED: guanine nucleotide-binding protein subunit alpha-12-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_171.1_03747.t1 | gi|47825404|ref|NP_001001476.1| | guanine nucleotide-binding protein G(12) alpha subunit [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_171.1_03747.t1 | gi|449669258|ref|XP_002163929.2| | PREDICTED: guanine nucleotide-binding protein subunit alpha-12 [Hydra vulgaris] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_171.1_03747.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_171.1_03747.t1 atgtcggatcaagaaaaagaacagaaaaaccggagtcgaaacatagataaacttattgcaaaggaaaaggttcacttccg aagaacaattaaaattttactgctgggtgccggggaaagtggtaaaagtacatttctcaaacaaatgcgaataattcacg gacagaggttcgacgaagggactgttcgtgaatttaaaagtgtcatatatggaaatgtagtaaagggaatgagagtgcta atagacgctcgtgaaaagcttggaattgcttggggagaggaagatcatgtgaagtatggtagttttgtatttggctatga tccaagctgtaaattggatgaagcaagttttgctcagtacatagaacctatgcggcatctgtggaaagatgctggaatca tgcaggcatttgataggaggagagagtttcagttgggtgactcaatacgatacttccttgatgacctggatcgtgtagcg caaaaggaggtcagcgatcacaacgacagaaatggttccagtgcttcgatggtattacatcaatcctatttctggcttcc tccagtgaattcgatcaagtgctattag |
|
Protein
| Protein ID | pfu_aug2.0_171.1_03747.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_171.1_03747.t1 MSDQEKEQKNRSRNIDKLIAKEKVHFRRTIKILLLGAGESGKSTFLKQMRIIHGQRFDEGTVREFKSVIYGNVVKGMRVL IDAREKLGIAWGEEDHVKYGSFVFGYDPSCKLDEASFAQYIEPMRHLWKDAGIMQAFDRRREFQLGDSIRYFLDDLDRVA QKEVSDHNDRNGSSASMVLHQSYFWLPPVNSIKCY |
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