Gene
| Gene Model ID | pfu_aug2.0_171.1_03750 |
|---|---|
| Locus | scaffold171.1 : 383089 ... 412366 : + |
| To GenomeBrowser | scaffold171.1:383089..412366 |
| Genes list of scaffold | scaffold171.1 |
| Synonym | pfu_aug1.0_22735.1_11481 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_171.1_03750.t1 | 3 | 1 | Peptidase_M3 | 111 | 189 | 0.0 | 166.7 | 0.15 | 1100.0 | -1.7 |
| pfu_aug2.0_171.1_03750.t1 | 3 | 2 | Peptidase_M3 | 237 | 313 | 0.0 | 166.7 | 4.2e-10 | 3.1e-06 | 26.5 |
| pfu_aug2.0_171.1_03750.t1 | 3 | 3 | Peptidase_M3 | 314 | 579 | 0.0 | 166.7 | 1.68156e-44 | 1.3e-40 | 139.8 |
| pfu_aug2.0_171.1_03750.t1 | 3 | 1 | Pro_isomerase | 582 | 727 | 9.5008e-43 | 146.0 | 0.0 | 9.5008e-43 | 146.0 |
| pfu_aug2.0_171.1_03750.t1 | 3 | 2 | Pro_isomerase | 918 | 942 | 9.5008e-43 | 146.0 | 0.98 | 7300.0 | -3.0 |
| pfu_aug2.0_171.1_03750.t1 | 3 | 3 | Pro_isomerase | 957 | 994 | 9.5008e-43 | 146.0 | 0.78 | 5800.0 | -2.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_171.1_03750.t1 | gi|591368416|ref|XP_007059051.1| | PREDICTED: peptidyl-prolyl cis-trans isomerase CWC27 homolog isoform X2 [Chelonia mydas] | 0.0 |
| pfu_aug2.0_171.1_03750.t1 | gi|558134382|ref|XP_006117086.1| | PREDICTED: peptidyl-prolyl cis-trans isomerase CWC27 homolog [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_171.1_03750.t1 | gi|573877805|ref|XP_006627143.1| | PREDICTED: peptidyl-prolyl cis-trans isomerase CWC27 homolog [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_171.1_03750.t1 | gi|591368418|ref|XP_007059052.1| | PREDICTED: peptidyl-prolyl cis-trans isomerase CWC27 homolog isoform X3 [Chelonia mydas] | 0.0 |
| pfu_aug2.0_171.1_03750.t1 | gi|591368414|ref|XP_007059050.1| | PREDICTED: peptidyl-prolyl cis-trans isomerase CWC27 homolog isoform X1 [Chelonia mydas] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_171.1_03750.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_171.1_03750.t1 atgggtatcaggttaccagatattccctcagatacatcagagacaaattcgttattacggtataatgaccctccaaagtt tgacgtaacacctggaagggtcttaactggtactgccaaaacaatcctagattatgatgtggagcttgaaaagcataaag aaaacctgaaagggaatcctcctcagacttttgaggacatgtttgatccgttagagaaggccagagttcctatgtggtgt gctcaccatgtgggacaacaaatgttttatagcagttctgaatacaagctaggcctcgtctgtgacaggaatgagaaaca aatctccagagcagaaaatgaccgatggaggagtagaactatatatgaatctgtcaagactgtgaacacaaacagagaca gtatgaagccctatcagcagagacttatagacatgtacctttataattcaaaaatacacggcacagaaataaagaaagtc aaaaaatatgacgaaatgatgcactggatgaaaatgttacaaaaatctaatgaacagtttagtcagaatttagattcctg ttatcgtctgtatatgagaaggatagaaaagagatcagagttaggctcgatgccagacaaatacttagcgttaatggtac caccagggggagatgtgagtaagggaccgtacaatctcaccatggatcctgttatttatcacggtatgatgcagcattgc tctaacggatttctcagacgagatatctgggagaaatacaacggtctggccgggcctgactatgtagaatcctactcatc gaatggtcagaccataaacgatatcagggcttacaggcaaaatatagcagagctgattggttataagaactttgccgagg tacagcttcagaggaggatggtaggatctgtggagaatctcgctaatttccttaatggctttcaggaaaatgaagttgct cagtatttcccttaccaaaagatcaaagaaaatatgatgcagatatgtacagatttatttggagttcaatttaagcaaat aacagactgtgataaattataccctactgtagaagtctatcaagttatagaggaagatggttcagaggcaggtacaatcc atatagatccatttaggagacccagcaagtttggtggatcctatacacatgttgccagagatcatagtgatgtgatggat acaaaacccctagtgttcatgtccctgaatttccagacgccaatcaacgactctgagccttgtttactgaccttagagga tgtatacacaatgtttggtgaacttggttgtacactgcaacatgtgttagccaaatctccgtacagtgagctggcaggct caaacaacctggagaaggatgctgcagacatctgttttcatgtactgaaagaaatggctctggaaccaagctttatcaag caactcagttcccatcattcaacgggagaaccagttcctgaaagattacttaatactgttctaaaagctgccagacatat gatagcatacgatgtgtcaaaggagctgtatctcagtgcacttgaccttgaactttgtatcaagactggtatatggtatc ctcacatggagaggatctggaagttgtacatgcctactcctctacatgaggaggactaccacccttgtcacatgactgac atgttcccaggagaaaaggcatgtggatactatactaatctgtggactcaggttttgttaataacatcagcaggagagct tgacgtagaactctggtccaaggaagcaccgaaagcatgtcggaattttgtacagctatgtatggaaggctattatgatg ggactatatttcaccgcgtggtcccagactttatagtgcaaggaggagaccctacaggcacaggcgaaggcggagagtct atttatggaaaaccatttaaggatgaatttcactcccgtttacggtttgtgcggcgtggtctggttgccatggctaatgc cggaaagaatgataatggcagtcagttcttcatcactatgggtcaaacacaggagctccaaaataaacatacaatatttg gaaaggttacaggcaatacagtgtataatctctccaagctacaagaagtggagattgatgacaatgaacgcccagtccat cctcataaaatcaagtcagcaatgattttatccaacccgtacgatgacatagtgccaagaaatcagaagaaagagaaatc agactcagaaaagaagtccaagtccaaaagtcagtctaaagcaacaaagaatttcaagttgttatcgtttggggaggagg cagaggaggatgaagtagagacagatttggcttgtaaggacttgtcagcaaaaggtaaaagtagccatgaccttttagat gacccaacactcagtacagaatcagccgtccaggagtctaaaggaaaaactgctttacctgaagatattaaatctgataa tgatggtgatgaaaattcatcagaagatgaagaacagaggaaaaagatgaaagatagtattaaagaaaaattaaaaggag acaaaaagtcagaacaacctaaaaaagacacagatgaaaaagatgattcaaaaacgaaggccttgaagttggaagccaag cgactcagacgggaacttaaaggactggataaagaagagaaagaagaaatcaagcaagaagagaaaaagccaccagcgaa tgatctagtagcagcttatatggcagaaaaggaaaaatacaaaaatatcaagaaagagaacaagaaggggaagggaagcc gagaggaaatgacattagcaatgttatcaaagtttcagtcaaaactgagtgctgccaaactgttgggtggggggtatagt gatgatgaagaagaagaagagaaggaggaggataaggaaaaagaagataaaaaggaagaggaagaggcagaagatgaagg agattcttcatggttgaggcatagattacaatttgaagacaggaagaggaaagtgatcgatgctaacatagctgatgagg acagatatgaaatttacgatccccggaatcctctgacaaaaagacgtcgagaaatgagcaaaaatgccatgaaagataaa aattcaaaacagcaaaaattatag |
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Protein
| Protein ID | pfu_aug2.0_171.1_03750.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_171.1_03750.t1 MGIRLPDIPSDTSETNSLLRYNDPPKFDVTPGRVLTGTAKTILDYDVELEKHKENLKGNPPQTFEDMFDPLEKARVPMWC AHHVGQQMFYSSSEYKLGLVCDRNEKQISRAENDRWRSRTIYESVKTVNTNRDSMKPYQQRLIDMYLYNSKIHGTEIKKV KKYDEMMHWMKMLQKSNEQFSQNLDSCYRLYMRRIEKRSELGSMPDKYLALMVPPGGDVSKGPYNLTMDPVIYHGMMQHC SNGFLRRDIWEKYNGLAGPDYVESYSSNGQTINDIRAYRQNIAELIGYKNFAEVQLQRRMVGSVENLANFLNGFQENEVA QYFPYQKIKENMMQICTDLFGVQFKQITDCDKLYPTVEVYQVIEEDGSEAGTIHIDPFRRPSKFGGSYTHVARDHSDVMD TKPLVFMSLNFQTPINDSEPCLLTLEDVYTMFGELGCTLQHVLAKSPYSELAGSNNLEKDAADICFHVLKEMALEPSFIK QLSSHHSTGEPVPERLLNTVLKAARHMIAYDVSKELYLSALDLELCIKTGIWYPHMERIWKLYMPTPLHEEDYHPCHMTD MFPGEKACGYYTNLWTQVLLITSAGELDVELWSKEAPKACRNFVQLCMEGYYDGTIFHRVVPDFIVQGGDPTGTGEGGES IYGKPFKDEFHSRLRFVRRGLVAMANAGKNDNGSQFFITMGQTQELQNKHTIFGKVTGNTVYNLSKLQEVEIDDNERPVH PHKIKSAMILSNPYDDIVPRNQKKEKSDSEKKSKSKSQSKATKNFKLLSFGEEAEEDEVETDLACKDLSAKGKSSHDLLD DPTLSTESAVQESKGKTALPEDIKSDNDGDENSSEDEEQRKKMKDSIKEKLKGDKKSEQPKKDTDEKDDSKTKALKLEAK RLRRELKGLDKEEKEEIKQEEKKPPANDLVAAYMAEKEKYKNIKKENKKGKGSREEMTLAMLSKFQSKLSAAKLLGGGYS DDEEEEEKEEDKEKEDKKEEEEAEDEGDSSWLRHRLQFEDRKRKVIDANIADEDRYEIYDPRNPLTKRRREMSKNAMKDK NSKQQKL |
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