Gene
| Gene Model ID | pfu_aug2.0_171.1_03753 |
|---|---|
| Locus | scaffold171.1 : 439829 ... 447194 : + |
| To GenomeBrowser | scaffold171.1:439829..447194 |
| Genes list of scaffold | scaffold171.1 |
| Synonym | pfu_aug1.0_26013.1_62399 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| peroxisomal -dienoyl- partial | GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_171.1_03753.t1 | 1 | 1 | adh_short_C2 | 9 | 188 | 1.2e-26 | 93.9 | 2.2e-30 | 1.6e-26 | 93.5 |
| pfu_aug2.0_171.1_03753.t1 | 1 | 1 | adh_short | 9 | 115 | 7.2e-13 | 48.7 | 1.4e-16 | 1.0e-12 | 48.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_171.1_03753.t1 | gi|676490552|ref|XP_009065307.1| | hypothetical protein LOTGIDRAFT_229651 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_171.1_03753.t1 | gi|260824515|ref|XP_002607213.1| | hypothetical protein BRAFLDRAFT_118627 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_171.1_03753.t1 | gi|524888919|ref|XP_005101023.1| | PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_171.1_03753.t1 | gi|705678178|ref|XP_010117640.1| | PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase, partial [Chlamydotis macqueenii] | 0.0 |
| pfu_aug2.0_171.1_03753.t1 | gi|698447889|ref|XP_009818307.1| | PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase, partial [Gavia stellata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_171.1_03753.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_171.1_03753.t1 atgaactatgttcttttagcagggccagagtctgttataaatgctgtagaggaagccttgaaaaatttcagacgaattga cattcttgtgaatggtgctgctggtaatttcctgtgtccagcatccagtatgtcattcaatgcattcaggacagtgatgg agatagatgcacatggcacgttcaacgtcagtaaggtcgtatatgacaagtacatgaaggaccatggtggcgtcatagtc aacataacggcactccttcatgtaagaggacgtattctacaggcacatgctggctctgctaaagctgctatagaggcaat gacgagacatttagctgttgagtggggtttgaatggaatacgagtgatgtgtgtagctccaggtccaataggtgatacag agggaatgagtcgacttggtggtgctttattgactgaagaaatggagaagtcaattcctattcagagaatcggcacaaga gaagatataggaaatactgtgttgtacgtggttagtgacgcagcccagttactgacagggactacgatatatgctgacgg gggatcatggctcacagatagcaataactactatgaggctgtcaaatctggaggacttcggaaattatccaaaatgtga |
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Protein
| Protein ID | pfu_aug2.0_171.1_03753.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_171.1_03753.t1 MNYVLLAGPESVINAVEEALKNFRRIDILVNGAAGNFLCPASSMSFNAFRTVMEIDAHGTFNVSKVVYDKYMKDHGGVIV NITALLHVRGRILQAHAGSAKAAIEAMTRHLAVEWGLNGIRVMCVAPGPIGDTEGMSRLGGALLTEEMEKSIPIQRIGTR EDIGNTVLYVVSDAAQLLTGTTIYADGGSWLTDSNNYYEAVKSGGLRKLSKM |
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