Gene
| Gene Model ID | pfu_aug2.0_1710.1_01795 |
|---|---|
| Locus | scaffold1710.1 : 18375 ... 26775 : - |
| To GenomeBrowser | scaffold1710.1:18375..26775 |
| Genes list of scaffold | scaffold1710.1 |
| Synonym | pfu_aug1.0_522.1_22207 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein dimmed-like | GO:0046983 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1710.1_01795.t1 | 1 | 1 | HLH | 94 | 145 | 6.2e-17 | 61.0 | 1.6e-20 | 1.2e-16 | 60.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1710.1_01795.t1 | gi|524892709|ref|XP_005102880.1| | PREDICTED: protein dimmed-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1710.1_01795.t1 | gi|328777481|ref|XP_003249350.1| | PREDICTED: class A basic helix-loop-helix protein 15-like isoform X1 [Apis mellifera] | 9.99967e-42 |
| pfu_aug2.0_1710.1_01795.t1 | gi|383847777|ref|XP_003699529.1| | PREDICTED: class A basic helix-loop-helix protein 15-like isoform X2 [Megachile rotundata] | 9.99967e-42 |
| pfu_aug2.0_1710.1_01795.t1 | gi|759040028|ref|XP_011352589.1| | PREDICTED: protein dimmed-like [Cerapachys biroi] | 1.99993e-41 |
| pfu_aug2.0_1710.1_01795.t1 | gi|751202207|ref|XP_011170943.1| | PREDICTED: protein dimmed-like [Solenopsis invicta] | 1.99993e-41 |
Transcript
| Transcript ID | pfu_aug2.0_1710.1_01795.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1710.1_01795.t1 atgcgatctacaaaagctgaagccatgacgtcagcttttgattttgaaatgtccgaagacggaacagagcaaaccgacag cacaagtttctgggacattccgggcctgcgcgccactgactatcaaattagaaaaagagcaaaacgtgacggaccggcat cgccatcggattccgggacaggatctacaactgatgattctagcgaacggaagattacaagaagtcctaaaaagtcttcc aaacgtaggaaaggtgttagtgctcgagaaagaaatatacgcagattagaaagtaatgaaagagagaggcagcgaatgca ttcattaaacgatgcttttcaagatcttcgagaagtgattccgcacgtcaaactggacagaaaactttccaaaatagaga cactcactttggctaaaaattacattaaagccctgacaaacgtaatatgcgatatgcgcggagaggatgcgccgtatgag tttgacaacaatgcaaaaatggataataaatctgaggatgatgacgtcatcaacagcaatgacactgaggataccgttga cgcattggacatcgaaacgacatcagaattgcatgcttcatgccgaggtggaccaaccatgagtaatatggttcccataa agcatagcgacagggactttatttcgcgctataatgacgttatgttgaaatttacgtcataa |
|
Protein
| Protein ID | pfu_aug2.0_1710.1_01795.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1710.1_01795.t1 MRSTKAEAMTSAFDFEMSEDGTEQTDSTSFWDIPGLRATDYQIRKRAKRDGPASPSDSGTGSTTDDSSERKITRSPKKSS KRRKGVSARERNIRRLESNERERQRMHSLNDAFQDLREVIPHVKLDRKLSKIETLTLAKNYIKALTNVICDMRGEDAPYE FDNNAKMDNKSEDDDVINSNDTEDTVDALDIETTSELHASCRGGPTMSNMVPIKHSDRDFISRYNDVMLKFTS |
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