Gene
| Gene Model ID | pfu_aug2.0_1713.1_11824 |
|---|---|
| Locus | scaffold1713.1 : 46102 ... 47765 : - |
| To GenomeBrowser | scaffold1713.1:46102..47765 |
| Genes list of scaffold | scaffold1713.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1713.1_11824.t1 | 4 | 1 | EGF | 52 | 75 | 8.8e-09 | 35.1 | 6.7e-07 | 0.0033 | 17.3 |
| pfu_aug2.0_1713.1_11824.t1 | 4 | 2 | EGF | 85 | 104 | 8.8e-09 | 35.1 | 0.0084 | 41.0 | 4.2 |
| pfu_aug2.0_1713.1_11824.t1 | 4 | 3 | EGF | 152 | 190 | 8.8e-09 | 35.1 | 3.9e-09 | 1.9e-05 | 24.4 |
| pfu_aug2.0_1713.1_11824.t1 | 4 | 4 | EGF | 196 | 227 | 8.8e-09 | 35.1 | 0.00063 | 3.1 | 7.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1713.1_11824.t1 | gi|676464401|ref|XP_009056910.1| | hypothetical protein LOTGIDRAFT_233119 [Lottia gigantea] | 1.0e-09 |
| pfu_aug2.0_1713.1_11824.t1 | gi|504176054|ref|XP_004597519.1| | PREDICTED: sushi, nidogen and EGF-like domain-containing protein 1 [Ochotona princeps] | 1.0e-08 |
| pfu_aug2.0_1713.1_11824.t1 | gi|759167272|ref|XP_011374589.1| | PREDICTED: sushi, nidogen and EGF-like domain-containing protein 1, partial [Pteropus vampyrus] | 1.0e-08 |
| pfu_aug2.0_1713.1_11824.t1 | gi|242018517|ref|XP_002429721.1| | low-density lipoprotein receptor, putative [Pediculus humanus corporis] | 9.0e-08 |
| pfu_aug2.0_1713.1_11824.t1 | gi|524877779|ref|XP_005095587.1| | PREDICTED: neurogenic locus notch homolog protein 4-like [Aplysia californica] | 1.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_1713.1_11824.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1713.1_11824.t1 atgaagcttttacaaattgtgttgccgttgttactaatcagcataagttcgtctttttcatcgaagttggaactttcaag ctttggaaagagacttctgtcacgtatccggagaaacaaacgagaaattctaaaggaactgtgtccaagaattggatgcc agaatggtgtatgtaaagaagtgaataagaagataacttgcgaatgtgacaagaattggactgggagtatgtgccagatt ccttgcccacgggattgtggccctggtggggtgtgcgtcgtggtggatggtcttccacagtgcgcttgttcgtcgtttag tccgaattgtaacgctatcaaagacagatccactcctagcatcatagctataaaaccattggaagccgttattacgaaac caataaacgttgcagaaataacagaaaataaaataaagtatgtgccttcagattgttcagacgttggcttcatgtgcctt aatggtggcacgtgcttcaaacatatttctgtggccgataagaagttaaggggagtgcactgtcagtgtcccaaaggttt taatggggatctatgccagacaaggtgctcactccgatgtcaaaatcaaggaacttgtcacaaggacagagcttcgggta aacaaatgtgtctgtgtacctgggaatttaaaggaaaacattgtggagaaagaaacaatttattcgacgtaatgaagaat ttataa |
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Protein
| Protein ID | pfu_aug2.0_1713.1_11824.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1713.1_11824.t1 MKLLQIVLPLLLISISSSFSSKLELSSFGKRLLSRIRRNKREILKELCPRIGCQNGVCKEVNKKITCECDKNWTGSMCQI PCPRDCGPGGVCVVVDGLPQCACSSFSPNCNAIKDRSTPSIIAIKPLEAVITKPINVAEITENKIKYVPSDCSDVGFMCL NGGTCFKHISVADKKLRGVHCQCPKGFNGDLCQTRCSLRCQNQGTCHKDRASGKQMCLCTWEFKGKHCGERNNLFDVMKN L |
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