Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1718.1_28487
Locus scaffold1718.1 : 134346 ... 136798 : +
To GenomeBrowser scaffold1718.1:134346..136798
Genes list of scaffold scaffold1718.1
Synonym pfu_aug1.0_93.1_43465

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1718.1_28487.t1 gi|731487299|ref|XP_010589856.1| PREDICTED: heat shock 70 kDa protein 12B isoform X2 [Loxodonta africana] 2.0e-18
pfu_aug2.0_1718.1_28487.t1 gi|344279764|ref|XP_003411657.1| PREDICTED: heat shock 70 kDa protein 12B isoform X1 [Loxodonta africana] 2.0e-18
pfu_aug2.0_1718.1_28487.t1 gi|593757299|ref|XP_007117461.1| PREDICTED: heat shock 70 kDa protein 12B [Physeter catodon] 2.0e-18
pfu_aug2.0_1718.1_28487.t1 gi|586488821|ref|XP_006874885.1| PREDICTED: heat shock 70 kDa protein 12B isoform X2 [Chrysochloris asiatica] 2.0e-18

Transcript
Transcript IDpfu_aug2.0_1718.1_28487.t1
Definition-
>pfu_aug2.0_1718.1_28487.t1
atggcaaaaagcaaatcacaagcacacttgttttctgttgctcttgattttggaacaacattttctggattcgcctattc
aacaacaagtgactttaaggagaggccagaccaggttcatgcatatacctcatggaacgccggcggtcaagctcttattt
caagtaaaactccgacatgtcttctcttgacagctgaaaaggagtttgaggcttttggatacgaagcggagaacaagtat
gcagacctcgctctagatggcttacatagggaccgatactactttcgacgatacaaaatgaagttacatggaaataag

Protein
Protein IDpfu_aug2.0_1718.1_28487.t1
Definition-
>pfu_aug2.0_1718.1_28487.t1
MAKSKSQAHLFSVALDFGTTFSGFAYSTTSDFKERPDQVHAYTSWNAGGQALISSKTPTCLLLTAEKEFEAFGYEAENKY
ADLALDGLHRDRYYFRRYKMKLHGNK

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