Gene
| Gene Model ID | pfu_aug2.0_172.1_07088 |
|---|---|
| Locus | scaffold172.1 : 59296 ... 83448 : + |
| To GenomeBrowser | scaffold172.1:59296..83448 |
| Genes list of scaffold | scaffold172.1 |
| Synonym | pfu_aug1.0_184.1_36353 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_172.1_07088.t1 | 2 | 1 | MFS_1 | 97 | 295 | 1.5e-24 | 86.4 | 1.5e-15 | 1.1e-11 | 44.0 |
| pfu_aug2.0_172.1_07088.t1 | 3 | 1 | MFS_2 | 116 | 283 | 1.4e-21 | 76.3 | 2.6e-18 | 1.9e-14 | 52.9 |
| pfu_aug2.0_172.1_07088.t1 | 3 | 2 | MFS_2 | 394 | 478 | 1.4e-21 | 76.3 | 6.1e-11 | 4.5e-07 | 28.6 |
| pfu_aug2.0_172.1_07088.t1 | 2 | 2 | MFS_1 | 395 | 549 | 1.5e-24 | 86.4 | 2.9e-16 | 2.2e-12 | 46.3 |
| pfu_aug2.0_172.1_07088.t1 | 3 | 3 | MFS_2 | 509 | 555 | 1.4e-21 | 76.3 | 0.006 | 45.0 | 2.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_172.1_07088.t1 | gi|676466067|ref|XP_009057447.1| | hypothetical protein LOTGIDRAFT_163134 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_172.1_07088.t1 | gi|675868196|ref|XP_009019658.1| | hypothetical protein HELRODRAFT_188635 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_172.1_07088.t1 | gi|260827030|ref|XP_002608468.1| | hypothetical protein BRAFLDRAFT_146172 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_172.1_07088.t1 | gi|734611514|ref|XP_010733165.1| | PREDICTED: solute carrier family 45 member 3-like [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_172.1_07088.t1 | gi|657583293|ref|XP_008295747.1| | PREDICTED: solute carrier family 45 member 3 [Stegastes partitus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_172.1_07088.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_172.1_07088.t1 atggactcgtacgagcttagcatgatggaatacaatttaaagcacaggtcctcatccgtccttggtcattatgacaagcc gagcccaaatgtaccgtggacatcataccagtacggggattatcactcatgtgtgacagaggattcctcctaccagctcg ctcaatcaaccaatcaaaatcacagaaagagatgtgaatccccatccaatatggcttccaaatcattgtccttagtgcag atcgtgctcctgaatgcagtagtatgtggtatagagatatgtgcttgtgctgggttcacgtacgtaccacccatgctgtt gaaggctggatacacagaagaaaacatgagcatcatacttgggttaggtcctttgttagctttctttcttgtaccgataa taggtcgtgcaagtgatagttgtaaaagtcactatggacgcaggcgtccgtttatccttggtatatccttacttttagct gtctctctgatcattgtgccatatggagatgttataagcctgtggtttgtaggaccagggtcatggagtaagtcagtgac tgttggtatgcttactataggggtagtaatgttagactttactagccaggcatgtctcacaccatgtgaggcattactgt cagacgcctccaaggacaccgaccaacatgagaaagtgtttaccgtctattctcagatgataagtcttggagggttcatc ggctacctggtaacggcattggattggaactccactatgtatggtagctttataggaggacaagaaaaatctgtgttttc tatgttggttgtgattttgatgttgttactgtgcgctactctgatggttgcagaagaggcaccgctagctacggaagaaa caaatgagatagagaaaggtccttttctacaaaaacaaaatatcaatgatcttctgcttgctcacaactctgctaatacc ctggaatctgggtatgaatccagtgcctccgataatgattcctccgatggtctgatgcgatcaaataccagaaggaacaa acattttacaaaatttttgtcaaaatcctataggactactcccctgcgttgtctgtgttatcctgcggtgtacgagggaa gtcctaatgccgaggagaattcatatctacgcatgcgttatgacgagggtgtccgtatgggcagctggggactactcttt cactgtatcacatctaccgtatatgctatgtttatagagagacttgtagagaagtatggcagtaagaggacatatttatg tggtatgattgtgtttactatctctatgctgggaatggtcatgtacagacatgttgtgtttgtcagcatcatggccgccc tgacaggattcgcctacgcaacactaactaccatccccttcatactcatcacaaaatatcattcagaaaaagaggtattc tttagtgactgttcatcatcgtccaagcctgtttcacagcagagaggtatggctaccgacatggccacgttagattctgc ctacttcctatcgcaggtcgttctttcggcactgatgggatatgtcgtccatgtgacgggaaccgtgctctcgtacatcg ttgtagcaggtgtcatgggacttctaagctgcttcttcatacgacagattgtagtctgtcctgaagatctcaaaccacgc acaagacatcatcgtcatcatcaaaatagaacacttcacttatag |
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Protein
| Protein ID | pfu_aug2.0_172.1_07088.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_172.1_07088.t1 MDSYELSMMEYNLKHRSSSVLGHYDKPSPNVPWTSYQYGDYHSCVTEDSSYQLAQSTNQNHRKRCESPSNMASKSLSLVQ IVLLNAVVCGIEICACAGFTYVPPMLLKAGYTEENMSIILGLGPLLAFFLVPIIGRASDSCKSHYGRRRPFILGISLLLA VSLIIVPYGDVISLWFVGPGSWSKSVTVGMLTIGVVMLDFTSQACLTPCEALLSDASKDTDQHEKVFTVYSQMISLGGFI GYLVTALDWNSTMYGSFIGGQEKSVFSMLVVILMLLLCATLMVAEEAPLATEETNEIEKGPFLQKQNINDLLLAHNSANT LESGYESSASDNDSSDGLMRSNTRRNKHFTKFLSKSYRTTPLRCLCYPAVYEGSPNAEENSYLRMRYDEGVRMGSWGLLF HCITSTVYAMFIERLVEKYGSKRTYLCGMIVFTISMLGMVMYRHVVFVSIMAALTGFAYATLTTIPFILITKYHSEKEVF FSDCSSSSKPVSQQRGMATDMATLDSAYFLSQVVLSALMGYVVHVTGTVLSYIVVAGVMGLLSCFFIRQIVVCPEDLKPR TRHHRHHQNRTLHL |
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