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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_172.1_07090
Locus scaffold172.1 : 103595 ... 109185 : -
To GenomeBrowser scaffold172.1:103595..109185
Genes list of scaffold scaffold172.1
Synonym pfu_aug1.0_184.1_36354

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_172.1_07090.t1 gi|521460300|ref|YP_008146935.1| 3.0e-12
pfu_aug2.0_172.1_07090.t1 gi|674068963|ref|XP_008841530.1| PREDICTED: zinc finger protein 512B isoform X3 [Nannospalax galili] 6.0e-09
pfu_aug2.0_172.1_07090.t1 gi|674068965|ref|XP_008841532.1| PREDICTED: zinc finger protein 512B isoform X4 [Nannospalax galili] 6.0e-09
pfu_aug2.0_172.1_07090.t1 gi|674068961|ref|XP_008841529.1| PREDICTED: zinc finger protein 512B isoform X2 [Nannospalax galili] 7.0e-09
pfu_aug2.0_172.1_07090.t1 gi|674068959|ref|XP_008841528.1| PREDICTED: zinc finger protein 512B isoform X1 [Nannospalax galili] 7.0e-09

Transcript
Transcript IDpfu_aug2.0_172.1_07090.t1
Definition-
>pfu_aug2.0_172.1_07090.t1
atgaagagtgatccacaaaatcctgacttaacacagcagttacacaacttacaaaaagaaatctttgttctcagtgagca
acagaaaggaatagtacaaagcttgaagaaggagatagtacatcgtcaacccgcaacagtagcacaactggtccagcaga
ccaagcaggtgtctgtagcaccgatgtcagtgtcacaacctattatactgccaatgagtgccacactagctccacccctg
gtgcaggtgctgcctaaaccaatcggtgtcactcaacctattggtgttactcaatccattggtgtcactcaacctattgg
tgttactcaacccattggtgttactcaacccattggtgttgcacagcagattggtgttactcagcctgttggactggcac
cgatgggcattactcaacctgtaggtatttcccaccatgtgggtgtgtctcagcctgttggcttgaccacacccatcaac
atgacacctcagatagccatgtctcagcagatgtgcgtaggtcaaggcttaccacagccgacatttcagctgaccgccac
catgcagcctgtgattggtcaagttatgcagccattacagactgtgagacccatacagaatccagccttctacaaacagc
ctatccagccaaagcctgtagtggagaatgtgccaacaagtctacctaatacccagcctgtgacagtaaaaccttcagtg
actgtaagccaagaggtcaaggacaaccctgtgtcccagggaaacacaaatagtgcccagcgggctgcatcacctcctat
aagggttcctcagtactcactacatcggcctgcaatactacagaattccactaaatctcctgtttccaagccatcaacaa
caccttccacattatcatcatatacgcgtaaaccatcagatattgatagaaccgagcaggtcaaacccagtatcgtcaaa
cccaacccagtcaagccccccgtccctgtcagacaaccacagccagtcaatgaagaaaagcaggtcagtgtcctgctaaa
agtaggtggtagtaggattgtcctggattga

Protein
Protein IDpfu_aug2.0_172.1_07090.t1
Definition-
>pfu_aug2.0_172.1_07090.t1
MKSDPQNPDLTQQLHNLQKEIFVLSEQQKGIVQSLKKEIVHRQPATVAQLVQQTKQVSVAPMSVSQPIILPMSATLAPPL
VQVLPKPIGVTQPIGVTQSIGVTQPIGVTQPIGVTQPIGVAQQIGVTQPVGLAPMGITQPVGISHHVGVSQPVGLTTPIN
MTPQIAMSQQMCVGQGLPQPTFQLTATMQPVIGQVMQPLQTVRPIQNPAFYKQPIQPKPVVENVPTSLPNTQPVTVKPSV
TVSQEVKDNPVSQGNTNSAQRAASPPIRVPQYSLHRPAILQNSTKSPVSKPSTTPSTLSSYTRKPSDIDRTEQVKPSIVK
PNPVKPPVPVRQPQPVNEEKQVSVLLKVGGSRIVLD

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