Gene
| Gene Model ID | pfu_aug2.0_172.1_07091 |
|---|---|
| Locus | scaffold172.1 : 109386 ... 119020 : + |
| To GenomeBrowser | scaffold172.1:109386..119020 |
| Genes list of scaffold | scaffold172.1 |
| Synonym | pfu_aug1.0_184.1_36355 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ribonuclease 3-like | GO:0003723 GO:0004525 GO:0006396 GO:0016075 GO:0090502 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_172.1_07091.t1 | 1 | 1 | dsrm | 37 | 107 | 1.8e-11 | 44.4 | 7.5e-15 | 3.7e-11 | 43.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_172.1_07091.t1 | gi|676426257|ref|XP_009044566.1| | hypothetical protein LOTGIDRAFT_230088 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_172.1_07091.t1 | gi|524901719|ref|XP_005107264.1| | PREDICTED: ribonuclease 3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_172.1_07091.t1 | gi|675883366|ref|XP_009027185.1| | hypothetical protein HELRODRAFT_68646, partial [Helobdella robusta] | 0.0 |
| pfu_aug2.0_172.1_07091.t1 | gi|746868648|ref|XP_011065456.1| | PREDICTED: ribonuclease 3 isoform X2 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_172.1_07091.t1 | gi|157119283|ref|XP_001653338.1| | AAEL008592-PA [Aedes aegypti] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_172.1_07091.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_172.1_07091.t1 atgggaagtttgtatgtagacaaagacttgcagttctgtcaggcattttgtaatgtatgtttcttcccaagactcaagga tttcatcttgaatcaagactggaatgaccccaagtcccagttacaacagtgttgtctgactcttagagagctggatggtg gtgaaccagacatacctatatacaaaatgatagagtcaattggtcctacgaacacaaggcgatacacagtggctgtttac ttccgtggggaacgtttagcaactggagtgggacacagcatacagcaagcagaaatgtcagcagctaccaacgccctcaa tgaaagatcaggtagacttagacaactcgaaaatcaaaatgtacaaaatctaagtattttcactgctttaacctcaacca tggctttacagcaggtagaaagtaacacccttagtcatcaggaaaatagtcaggataaggaagaattggcagaaaatgta tctgtaaatagctcagttgaaaacaagctagaacatataaataacgggtgcaaagaaacaaatgagcattttttagagtt acccagcctcactccactccctccggacaaaatagaagcacaactaaacaggagccaaagtacagaatctccatgcgaca aaaatcgagattcaaatcagcaaaatgcgctacaagaatggagagactcgggctgtcctagaggcgatcatccccttttt ctgacaaaaaaagaagatgcaaagaaagacatacgacgtcaagttagacaagaatctgcaatcgatatgaagcgtttctt caacaagcttatggaaaacccagactcaactttcttcaacaaaaacaagggagagaatatccaccaaggaactgtcgctt tggacgttggtggtatagaatctgatagccctatagaacagagacgagcatttgcaaatttctatgaagatctggcagtc ccaaaagacgaccgattcgatgcaaaaacattcgaagctagtaaaacccgctgttggcttatagaaaaattggcaattta taaacgagaagagatcatacccttcacaatactggaaggtgggaatgcaataaaaactctcaataacaataaagcttctg atgaatatggtctgtcagctgaacatattaaatttgctggagaaccccttgttgatgttttaaccgatttattcaaccaa attctgaaagaaggaaatatcccagacaaattcaaaacaggatacattaccccagtctttaaaaaggggaaaaacgtcag taaagtagagagtaacagagggattacagttgcctctatctttggtaaaatattcgaaaaacttctacttgtacgattct ccgcgatgaatagaaatcagtcaaatctgcaatttggatttacaaaagacacatcacctgcaattgcagctcttttagtc tcagaggcagctttagactcaaaacagagacgtgtaccattcatcttgggaactctagatagtcaaaaagcatttgatgt tgttcaccatgatatcctgttagacaaactataccatactggaataaatttaagtgtgttggatgtccaactgctgcgga cgatctctcactcatgtctgagtgtacacaataatttggagctatgttga |
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Protein
| Protein ID | pfu_aug2.0_172.1_07091.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_172.1_07091.t1 MGSLYVDKDLQFCQAFCNVCFFPRLKDFILNQDWNDPKSQLQQCCLTLRELDGGEPDIPIYKMIESIGPTNTRRYTVAVY FRGERLATGVGHSIQQAEMSAATNALNERSGRLRQLENQNVQNLSIFTALTSTMALQQVESNTLSHQENSQDKEELAENV SVNSSVENKLEHINNGCKETNEHFLELPSLTPLPPDKIEAQLNRSQSTESPCDKNRDSNQQNALQEWRDSGCPRGDHPLF LTKKEDAKKDIRRQVRQESAIDMKRFFNKLMENPDSTFFNKNKGENIHQGTVALDVGGIESDSPIEQRRAFANFYEDLAV PKDDRFDAKTFEASKTRCWLIEKLAIYKREEIIPFTILEGGNAIKTLNNNKASDEYGLSAEHIKFAGEPLVDVLTDLFNQ ILKEGNIPDKFKTGYITPVFKKGKNVSKVESNRGITVASIFGKIFEKLLLVRFSAMNRNQSNLQFGFTKDTSPAIAALLV SEAALDSKQRRVPFILGTLDSQKAFDVVHHDILLDKLYHTGINLSVLDVQLLRTISHSCLSVHNNLELC |
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